CX287797

Overview
NameCX287797
Unique NameCX287797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length332
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287797 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.203e-12
Identity = 30/55 (54.55%), Postives = 45/55 (81.82%), Query Frame = 1 
Query:  166 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSS 330
            A+  LG+K + G+ RVT+++++N+L V+S P+V+KSP SD YIVFGEAK+ED +S
Sbjct:   33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNS 87
The following BLAST results are available for this feature:
BLAST of CX287797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
NACA_CRYNE5.203e-1254.55Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC01013D10SK Veg1 Citrus clementina cDNA clone C01013D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287797 ID=CX287797; Name=CX287797; organism=Citrus clementina; type=EST; length=332bp
GAAGAGCAAAAGCTCAACCCCGATGAGCCTGTAGTCGAGGACGACGATGA
TGAGGATGATGATGAGGAGGATGAGGATGATGACAAGGATGAAGACGATG
TGGAAGGGAAAGGAGATGGAAGTGGTCGCTCAAAACAGAGCAGGAGTGAA
AAGAAGAGTCGGAAAGCAATGTTGAAACTTGGAATGAAGCCAATCCCTGG
TGTCAGTCGAGTTACAGTTAAAAAGAGCAAAAATATTTTGTTTGTTATCT
CCAAACCAGATGTTTTCAAGAGTCCTACATCTGACACATACATTGTCTTT
GGGGAAGCAAAGATCGAGGATCTGAGTTCACA
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