CX287815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCEA_ECO57 (Glutamate decarboxylase alpha OS=Escherichia coli O157:H7 GN=gadA PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40 Identity = 80/169 (47.34%), Postives = 112/169 (66.27%), Query Frame = 2 Query: 113 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 619 E + S F ++ + P + + + A+QIINDEL LDGN R NLA+F TW + KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP DKPN+V G VQ+CW KFARY++VEL+E Sbjct: 12 ELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELRE 179
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: GADA_DICDI (Glutamate decarboxylase A OS=Dictyostelium discoideum GN=gadA PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.162e-39 Identity = 82/169 (48.52%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 113 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 619 + + ++AS + ++++ E S E +I DEL+LDGN + NLA+F T ++ E LM I+KN +D DEYP T E+++RCV+I+A L+N+P E SET +G T GSSEA ML G+A K +W+ RK +GKPFDKPNIVTG VQ+CW KFA YF++EL+E Sbjct: 12 KGFYDSYASPPATKEISKYSLKEESNKPEVIRDLIIDELLLDGNAKQNLATFCQTDLDKEIHVLMDKCIDKNMIDKDEYPQTAEIESRCVHILADLWNSP-ESSET-IGCSTTGSSEAAMLGGMALKWRWRENRKKQGKPFDKPNIVTGP-VQICWHKFALYFDIELRE 177
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.518e-39 Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 2 Query: 113 ESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 619 E + S F ++ + P + + + A+QIINDEL LDGN R NLA+F TW + KLM +INKN++D +EYP + + RCVN++A L++AP + AVG T+GSSEA ML G+A K +W+ + +A GKP +KPN+V G VQ+CW KFARY++VEL+E Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGP-VQICWHKFARYWDVELRE 179
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38 Identity = 78/182 (42.86%), Postives = 114/182 (62.64%), Query Frame = 2 Query: 80 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKE 619 M+ K + E + F S + LP++ + + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++E Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCVYWDIEMRE 180
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38 Identity = 78/182 (42.86%), Postives = 114/182 (62.64%), Query Frame = 2 Query: 80 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKE 619 M+ K + E + F S + LP++ + + SI AYQ++ DE++ +GN RLNLA+F T+MEPE KLM + KN +D EYP TTE++NRCVN+IA L+NA + E +G T+GSSEA ML G+A K W+ + + G + KPN+V + QVCWEKF Y+++E++E Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWNA--SEKEKFMGTSTIGSSEACMLGGMAMKFSWRKRAEKLGLDINAKKPNLVISSGYQVCWEKFCIYWDIEMRE 180
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: GADB_DICDI (Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.049e-37 Identity = 74/172 (43.02%), Postives = 109/172 (63.37%), Query Frame = 2 Query: 104 ESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE 619 + +S++ + + +F + ++ E ++I DEL+LDGN + NLA+F T ++ +M I+KN +D DEYP + E++NRC++I+A L+NAP DS +G T GSSEA ML GLA K W+ RK G P+DKPNIVTG VQ+CW KFA YF++E++E Sbjct: 7 DKHKSLYDNYVQSATTEEIAKFKLADDPNEPETIKKLIMDELLLDGNSKQNLATFCQTDLDKNIHSIMDKCIDKNMIDKDEYPQSAEIENRCLHILADLWNAP--DSSDTIGCSTTGSSEAAMLGGLALKWNWRENRKKLGLPYDKPNIVTGP-VQICWHKFALYFDIEIRE 175
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCEC_LISIN (Probable glutamate decarboxylase gamma OS=Listeria innocua GN=lin2528 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36 Identity = 77/180 (42.78%), Postives = 112/180 (62.22%), Query Frame = 2 Query: 98 FSESDESIHST-----FASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELK 616 +SE+D+ H + F S S+P++ + + + AYQ++ D+LM +GN R NLA+F T+ME E + LM + KN +D EYP T EL+NRCVNI+A L+NAP E S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ Sbjct: 3 YSENDKRKHESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKEMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMR 180
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCEC_LISMO (Probable glutamate decarboxylase gamma OS=Listeria monocytogenes GN=lmo2434 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 72/164 (43.90%), Postives = 104/164 (63.41%), Query Frame = 2 Query: 131 FASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELK 616 F S S+P++ + + + AYQ++ D+LM +GN R NLA+F T+ME E + LM + KN +D EYP T EL+NRCVNI+A L+NAP + S +G TVGSSEA ML GLA K +W+N + G +PN++ + QVCWEKF Y++V+++ Sbjct: 19 FGSEEESTSIPKYVLKKEPMEPRIAYQLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCVNILADLWNAPKDMS--YLGTSTVGSSEACMLGGLAMKFRWRNNAEKRGLDIQAKRPNLIISSGYQVCWEKFCVYWDVDMR 180
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.920e-34 Identity = 70/151 (46.36%), Postives = 101/151 (66.89%), Query Frame = 2 Query: 164 RFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK 616 ++++P+ +P + +YQ+I++EL LDGNP LNLASFV T+ + KL+ + KN D DEYP EL RC++++A+L++A E +G T GSSEAIML GLA K++W+++ K GK KPNI+ + QV EKF RYFEVE + Sbjct: 59 KYSVPKKGLPADLSYQLIHNELTLDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECR 207
BLAST of CX287815 vs. ExPASy Swiss-Prot
Match: DCEB_LISIN (Glutamate decarboxylase beta OS=Listeria innocua GN=gadB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.772e-33 Identity = 73/181 (40.33%), Postives = 110/181 (60.77%), Query Frame = 2 Query: 80 MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPF--DKPNIVTGANVQVCWEKFARYFEVELK 616 M+ SK ES + F S +P++T+ + + AY+++ DEL+ +G+ R NLA+F T+ME E KLM + KN +D EYP T EL+NRCVNIIA L++AP + + +G T+GSSEA ML G+A K W+ + + G KPN+V + QVCWEKF Y++++++ Sbjct: 1 MLYSKENKES--YLEPVFGSSAEDRDIPKYTLAKEPLEPRIAYRLVKDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNIIADLWHAPKD--QKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSGYQVCWEKFCVYWDIDMR 177 The following BLAST results are available for this feature:
BLAST of CX287815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287815 ID=CX287815; Name=CX287815; organism=Citrus clementina; type=EST; length=620bpback to top |