CX287916

Overview
NameCX287916
Unique NameCX287916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_LAMGU (Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.939e-12
Identity = 40/130 (30.77%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    1 EAFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTE 390
            E+ LVHG S G+G  A Q+ +    +V  TAG+EE   V    GA    N++ +  + ++K+  G KG+DVI++ +       +L+ L+  GR+ I+G++G    E+N      K  +++   L S + E
Sbjct:  150 ESVLVHGASGGVGLAACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHREDINIDKIKKSVGEKGIDVIIEMLANVNLSNDLNLLSQGGRVIIVGSKG--PVEINPRDTMTKESSIKGVTLFSSTKE 277          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.720e-12
Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 1
Query:   10 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 351
            LV   + G G FA+Q+ K     V  T  S+EK A  K LG D  INYKTE  V  V ++   +GVDV+ + +G + F   +D+L   GRL +IG   G +T   ++ + A  L
Sbjct:  177 LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL 289          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.776e-12
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 1
Query:   10 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFA----KRLTVQAAGLR 375
            LV   + G G FA+Q+ K     V  T  S+EK A  K +G D  INY+TE     +K+E   +GVDV+ + +G + F   +D+L   GRL +IG   G ++   ++ + A     +L  ++A LR
Sbjct:  177 LVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEY-PEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASLR 301          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: QOR_YEAST (Probable quinone oxidoreductase OS=Saccharomyces cerevisiae GN=ZTA1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11
Identity = 37/116 (31.90%), Postives = 57/116 (49.14%), Query Frame = 1
Query:   10 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 357
            L+   + G+G    Q+ K +G      A ++EKL + K+ GA+  IN   ED + +V + T GKGVD   D +G   F+ +L +L   G     G   G     +IT L  K +T+
Sbjct:  153 LLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITL 268          
BLAST of CX287916 vs. ExPASy Swiss-Prot
Match: ZADH2_BOVIN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.703e-11
Identity = 41/114 (35.96%), Postives = 58/114 (50.88%), Query Frame = 1
Query:   10 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFIIGTQGGAKTELNITSLFAKRL 351
            LV   + G G FA+Q+ K     V  T  S EK A  K +G D  INY TE  V  V  +   +GVDV+ + +G + F   +D+L   GRL +IG   G +T   ++ + A  L
Sbjct:  177 LVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTE-HVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTL 289          
The following BLAST results are available for this feature:
BLAST of CX287916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
QOR_LAMGU3.939e-1230.77Quinone oxidoreductase OS=Lama guanicoe GN=CRYZ PE... [more]
ZADH2_HUMAN6.720e-1237.72Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_MOUSE8.776e-1234.13Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_YEAST2.553e-1131.90Probable quinone oxidoreductase OS=Saccharomyces c... [more]
ZADH2_BOVIN9.703e-1135.96Zinc-binding alcohol dehydrogenase domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionC01014G06SK Veg1 Citrus clementina cDNA clone C01014G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287916 ID=CX287916; Name=CX287916; organism=Citrus clementina; type=EST; length=393bp
GAGGCATTTCTGGTTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGAT
TCAGATGGGAAAATGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTG
AGGAAAAGCTGGCTGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAAT
TACAAGACTGAGGATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAA
AGGTGTTGATGTAATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTA
ACCTCGACAGCTTGAACATTGATGGGAGGCTTTTCATAATTGGAACCCAG
GGTGGAGCTAAAACAGAATTAAATATAACTTCTCTGTTTGCTAAGCGCCT
CACTGTGCAAGCGGCTGGCTTGCGAAGCAGAAGTACAGAAAAC
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