CX287917

Overview
NameCX287917
Unique NameCX287917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAAB (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAA9 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH9) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAA8 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain NCTC 8325) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAA3 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain USA300) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAA2 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain JH1) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAA1 (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=lacG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.704e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGLH_BACSU (Aryl-phospho-beta-D-glucosidase bglH OS=Bacillus subtilis GN=bglH PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.144e-21
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   76 VDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKV-NWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            +D YHRYKED+ + A + F A+R SI+W+RIFP G  +  N +G+ +Y+ L + LLK  I P   + HY++P  L K Y G  +++V++ +  YA   FK +  +VK WMTF
Sbjct:   62 IDFYHRYKEDIALFAEMGFKAFRTSIAWTRIFPNGDEEEPNEEGLRFYDDLFDELLKHHIEPVVTISHYEMPLGLVKNYGGWKNRKVIEFYERYAKTVFKRYQHKVKYWMTF 173          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAAC (6-phospho-beta-galactosidase OS=Staphylococcus aureus (strain COL) GN=lacG PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.024e-21
Identity = 49/116 (42.24%), Postives = 70/116 (60.34%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y RY  D+++      +  R SI+WSRIFP G G+VN KGV YY++L     KR + P+  L+H+D PE L K     L+++ +  F DYA++CFK F + VK W TF
Sbjct:   45 TAEPASDFYDRYPVDLELSEKFGVNGIRISIAWSRIFPNGYGEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDG-DFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: ABGA_CLOLO (6-phospho-beta-glucosidase OS=Clostridium longisporum GN=abgA PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.024e-21
Identity = 45/114 (39.47%), Postives = 70/114 (61.40%), Query Frame = 1
Query:   70 VSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKV-NWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            + +D YHRYKED+ + A + F  +R SI+WSRIFP G  ++ N KG+ +Y+++ + L + GI P   L HY+ P  L KKY G  ++ ++  +  Y    F  + D+VK W+TF
Sbjct:   59 IGIDFYHRYKEDIKLFAEMGFKTFRLSIAWSRIFPNGDDEIPNEKGLEFYDKVFDELQRYGIEPLVTLSHYETPLNLSKKYNGWANRDLIGFYERYVRTVFTRYKDKVKYWLTF 172          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGLB_ECOLI (6-phospho-beta-glucosidase bglB OS=Escherichia coli (strain K12) GN=bglB PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.049e-20
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1
Query:   34 KPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTG-KVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            +P I+      DV++D YHRY ED+ + A + F   R SI+W+RIFP G   + N  G+A+Y++L + + + GI P   L HY++P  L K Y G  ++ V+  F  YA   F  +  +V  W+TF
Sbjct:   45 EPRILGKENIKDVAIDFYHRYPEDIALFAEMGFTCLRISIAWARIFPQGDEVEPNEAGLAFYDRLFDEMAQAGIKPLVTLSHYEMPYGLVKNYGGWANRAVIDHFEHYARTVFTRYQHKVALWLTF 170          
The following BLAST results are available for this feature:
BLAST of CX287917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STAAB4.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA94.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA84.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA34.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA24.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
LACG_STAA14.704e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
BGLH_BACSU6.144e-2141.96Aryl-phospho-beta-D-glucosidase bglH OS=Bacillus s... [more]
LACG_STAAC8.024e-2142.246-phospho-beta-galactosidase OS=Staphylococcus aur... [more]
ABGA_CLOLO8.024e-2139.476-phospho-beta-glucosidase OS=Clostridium longispo... [more]
BGLB_ECOLI3.049e-2037.306-phospho-beta-glucosidase bglB OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionC01014G07SK Veg1 Citrus clementina cDNA clone C01014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287917 ID=CX287917; Name=CX287917; organism=Citrus clementina; type=EST; length=410bp
TTCGGCACGAGGATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGC
CAATAATGCCACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAG
AGGATGTTGATATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCA
ATTTCCTGGTCCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAA
GGGAGTTGCATACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTA
TTACTCCATATGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAG
AAGAAGTACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGA
TTACGCTGACTTTTGCTTTAAGACATTTGGAGACAGAGTAAAGAATTGGA
TGACATTTAA
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