CX287917

Overview
NameCX287917
Unique NameCX287917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_LACCB (6-phospho-beta-galactosidase OS=Lactobacillus casei (strain BL23) GN=lacG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.201e-20
Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMT 405
            G  +WD F  K G        D + D YHRY ED+ +         R SI+WSRIFP G G+V  +GVA+Y++L        I P+  L+H+D PE L +     LS+ ++ DF  YA FCF+ F + VK W+T
Sbjct:   30 GRVLWDDFLDKQG----RFKPDPAADFYHRYDEDLALAEKYGHQVIRVSIAWSRIFPDGAGEVEPRGVAFYHKLFADCAAHHIEPFVTLHHFDTPERLHEAG-DWLSQEMLDDFVAYAKFCFEEFSE-VKYWIT 157          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_LACCA (6-phospho-beta-galactosidase OS=Lactobacillus casei GN=lacG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.201e-20
Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMT 405
            G  +WD F  K G        D + D YHRY ED+ +         R SI+WSRIFP G G+V  +GVA+Y++L        I P+  L+H+D PE L +     LS+ ++ DF  YA FCF+ F + VK W+T
Sbjct:   30 GRVLWDDFLDKQG----RFKPDPAADFYHRYDEDLALAEKYGHQVIRVSIAWSRIFPDGAGEVEPRGVAFYHKLFADCAAHHIEPFVTLHHFDTPERLHEAG-DWLSQEMLDDFVAYAKFCFEEFSE-VKYWIT 157          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: ASCB_ECOLI (6-phospho-beta-glucosidase ascB OS=Escherichia coli (strain K12) GN=ascB PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.201e-20
Identity = 46/113 (40.71%), Postives = 68/113 (60.18%), Query Frame = 1
Query:   73 SVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKV-NWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            + D YHRYKED+ +MA + F  +R SI+WSR+FP G     N +G+A+Y  +     K GI P   L H+D+P  L  +Y    ++++V+ F+ YA  CF+ F   VK W+TF
Sbjct:   66 ATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTF 178          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPM (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M28 GN=lacG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPG (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=lacG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPD (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=lacG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRP3 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M3 GN=lacG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRP1 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M1 GN=lacG PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: ARBB_ERWCH (6-phospho-beta-glucosidase OS=Erwinia chrysanthemi GN=arbB PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.793e-20
Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 1
Query:   19 DVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            ++  ++PG   ++   DV++D YHRY +D+ + A + F   R SI+W+RIFP G   + N  G+A+Y++L + L K GI P   L HY++P  L +K+ G  ++  +  F  YA   F  +  +VK W+TF
Sbjct:   44 EIVTRQPG---DSGIKDVAIDFYHRYPQDIALFAEMGFTCLRISIAWTRIFPQGDEAEPNEAGLAFYDRLFDELAKYGIQPLVTLSHYEMPYGLVEKHGGWGNRLTIDCFERYARTVFARYRHKVKRWLTF 171          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPF (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=lacG PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
The following BLAST results are available for this feature:
BLAST of CX287917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_LACCB5.201e-2039.556-phospho-beta-galactosidase OS=Lactobacillus case... [more]
LACG_LACCA5.201e-2039.556-phospho-beta-galactosidase OS=Lactobacillus case... [more]
ASCB_ECOLI5.201e-2040.716-phospho-beta-glucosidase ascB OS=Escherichia col... [more]
LACG_STRPM6.793e-2041.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPG6.793e-2041.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPD6.793e-2041.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP36.793e-2041.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP16.793e-2041.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
ARBB_ERWCH6.793e-2035.886-phospho-beta-glucosidase OS=Erwinia chrysanthemi... [more]
LACG_STRPF1.159e-1941.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]

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Properties
Property NameValue
Genbank descriptionC01014G07SK Veg1 Citrus clementina cDNA clone C01014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287917 ID=CX287917; Name=CX287917; organism=Citrus clementina; type=EST; length=410bp
TTCGGCACGAGGATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGC
CAATAATGCCACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAG
AGGATGTTGATATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCA
ATTTCCTGGTCCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAA
GGGAGTTGCATACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTA
TTACTCCATATGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAG
AAGAAGTACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGA
TTACGCTGACTTTTGCTTTAAGACATTTGGAGACAGAGTAAAGAATTGGA
TGACATTTAA
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