CX287917

Overview
NameCX287917
Unique NameCX287917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRP8 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M18 GN=lacG PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGDVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSDG-DFLNRENIEHFVNYAEFCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_LACLA (6-phospho-beta-galactosidase OS=Lactococcus lactis subsp. lactis GN=lacG PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19
Identity = 47/116 (40.52%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+++      +  R SI+WSRIFP G G+VN KGV +Y++L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFIDYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRMU (6-phospho-beta-galactosidase OS=Streptococcus mutans GN=lacG PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 1.513e-19
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G VN KG+A+Y+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+FCFK F + V  W TF
Sbjct:   45 TAEPASDFYHQYPVDLKLAEEFGVNGIRISIAWSRIFPKGYGAVNPKGLAFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVNYAEFCFKEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRU0 (6-phospho-beta-galactosidase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=lacG PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.976e-19
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +    N +  R SI+WSR+FP G G+VN KGV YY+ L     KRG+ P+  L+H+D PEAL       L++  +  F  YA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLAEEYNVNGIRISIAWSRVFPTGYGEVNRKGVEYYHNLFAECHKRGVEPFVTLHHFDTPEALHSNG-DFLNRDNIDHFVAYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPC (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=lacG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.581e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+ CFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVNYAELCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPB (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=lacG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.581e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+ CFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVNYAELCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRP6 (6-phospho-beta-galactosidase OS=Streptococcus pyogenes serotype M6 GN=lacG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.581e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV YY+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA+ CFK F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLSEEFGVNGIRISIAWSRIFPTGKGEVNPKGVEYYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVNYAELCFKEFSE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRGC (6-phospho-beta-galactosidase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=lacG PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.371e-19
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V+ W TF
Sbjct:   45 TAEPASDFYHKYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGEVNPKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRDNIEHFVDYAAFCFEEFPE-VRYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRZJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain JJA) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVDYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRSV (6-phospho-beta-galactosidase OS=Streptococcus sanguinis (strain SK36) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F +YA FCF+ F + V+ W TF
Sbjct:   45 TAEPASDFYHKYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGEVNPKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVNYAAFCFEEFPE-VRYWTTF 158          
The following BLAST results are available for this feature:
BLAST of CX287917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STRP81.159e-1941.386-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_LACLA1.159e-1940.526-phospho-beta-galactosidase OS=Lactococcus lactis... [more]
LACG_STRMU1.513e-1940.526-phospho-beta-galactosidase OS=Streptococcus muta... [more]
LACG_STRU01.976e-1941.386-phospho-beta-galactosidase OS=Streptococcus uber... [more]
LACG_STRPC2.581e-1940.526-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRPB2.581e-1940.526-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRP62.581e-1940.526-phospho-beta-galactosidase OS=Streptococcus pyog... [more]
LACG_STRGC3.371e-1940.526-phospho-beta-galactosidase OS=Streptococcus gord... [more]
LACG_STRZJ7.510e-1940.526-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG_STRSV7.510e-1939.666-phospho-beta-galactosidase OS=Streptococcus sang... [more]

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Properties
Property NameValue
Genbank descriptionC01014G07SK Veg1 Citrus clementina cDNA clone C01014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287917 ID=CX287917; Name=CX287917; organism=Citrus clementina; type=EST; length=410bp
TTCGGCACGAGGATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGC
CAATAATGCCACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAG
AGGATGTTGATATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCA
ATTTCCTGGTCCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAA
GGGAGTTGCATACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTA
TTACTCCATATGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAG
AAGAAGTACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGA
TTACGCTGACTTTTGCTTTAAGACATTTGGAGACAGAGTAAAGAATTGGA
TGACATTTAA
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