CX287917

Overview
NameCX287917
Unique NameCX287917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length410
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRPJ (6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNVKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVDYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRA3 (6-phospho-beta-galactosidase OS=Streptococcus agalactiae serotype III GN=lacG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 46/116 (39.66%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGV +Y++L     KR + P+  L+H+D PEAL       L++  ++ F +YA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYHKYPVDLALAEEYGVNGIRISIAWSRIFPTGYGEVNLKGVEFYHKLFEECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRDNIEHFVNYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_LACAC (6-phospho-beta-galactosidase OS=Lactobacillus acidophilus GN=lacG PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1
Query:   64 GDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMT 405
            GD + D YH Y ED+++      +  R SI+WSRIFP G G+V   GV +Y++L      R + P+  L+H+D PE L +     L+   + DF +YAD+CFK F + VK W+T
Sbjct:   46 GDPASDFYHNYVEDLELAEKFGGNVIRISIAWSRIFPNGDGEVKPNGVDFYHKLFAECDARHVEPFVTLHHFDTPEGLHEDG-DFLTHEKMDDFVEYADYCFKEFPE-VKYWIT 157          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG2_STRR6 (6-phospho-beta-galactosidase 2 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lacG2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVDYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG2_STRPN (6-phospho-beta-galactosidase 2 OS=Streptococcus pneumoniae GN=lacG2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.510e-19
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y+RY  D+ +      +  R SI+WSRIFP G G+VN KGV +Y+ L     KR + P+  L+H+D PEAL       L++  ++ F DYA FCF+ F + V  W TF
Sbjct:   45 TAEPASDFYNRYPVDLKLAEEYGVNGIRISIAWSRIFPTGYGQVNAKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNG-DFLNRENIEHFVDYAAFCFEEFPE-VNYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STAHJ (6-phospho-beta-galactosidase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=lacG PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.809e-19
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D Y++Y  D+++      +  R SI+WSRIFP G G+VN KGV YY+ L     +R + P+  L+H+D PE L       L+++ ++ F +YA FCF+ F + V  W TF
Sbjct:   44 TAEPASDFYNKYPIDLELSEKFGVNGIRISIAWSRIFPKGYGEVNPKGVEYYHNLFKECHRRHVEPFVTLHHFDTPETLHSDG-DFLNRKTIEYFVEYAKFCFEEF-EEVNYWTTF 157          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STRS7 (6-phospho-beta-galactosidase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=lacG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.185e-18
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGVA+Y+ L     K  + P+  L+H+D PEAL  +    L++  +  F  YA +CFK F + V  W TF
Sbjct:   45 TAEPASDFYHQYPVDLALAEQFGINGIRISIAWSRIFPEGFGEVNAKGVAFYHSLFAECHKHHVEPFVTLHHFDTPEALHSRG-DFLNRENIDHFVAYAAYCFKEFPE-VTYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG_STREM (6-phospho-beta-galactosidase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=lacG PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.185e-18
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 1
Query:   61 TGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            T + + D YH+Y  D+ +      +  R SI+WSRIFP G G+VN KGVA+Y+ L     K  + P+  L+H+D PEAL  +    L++  +  F  YA +CFK F + V  W TF
Sbjct:   45 TAEPASDFYHQYPIDLALAEQFGINGIRISIAWSRIFPEGFGEVNAKGVAFYHSLFAECHKHHVEPFVTLHHFDTPEALHSRG-DFLNRENIDHFVAYAAYCFKEFPE-VSYWTTF 158          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: BGLA_ECOLI (6-phospho-beta-glucosidase bglA OS=Escherichia coli (strain K12) GN=bglA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.850e-17
Identity = 42/113 (37.17%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   73 SVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGT-GKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMTF 408
            +VD Y  YKED+ + A + F  +R SI+W+RIFP G   + N +G+ +Y+ + + LLK  I P   L H+++P  L ++Y    +++VV  F  +A+  F+ +  +VK WMTF
Sbjct:   66 AVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTF 178          
BLAST of CX287917 vs. ExPASy Swiss-Prot
Match: LACG1_STRR6 (6-phospho-beta-galactosidase 1 OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=lacG1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.556e-16
Identity = 46/134 (34.33%), Postives = 73/134 (54.48%), Query Frame = 1
Query:    4 GTRIWDVFAKKPGIVANNATGDVSVDQYHRYKEDVDIMANLNFDAYRFSISWSRIFPYGTGKVNWKGVAYYNQLINYLLKRGITPYANLYHYDLPEALEKKYIGLLSKRVVKDFADYADFCFKTFGDRVKNWMT 405
            G  +WDV+ ++     +    D + D Y+RY+ED+ + A     A R SISW RIFP   G  N   V YY+++    LK  + P+ +L+H+D P+ + +     L++  +  F  YA FCF+ F + VK+W T
Sbjct:   34 GINMWDVYLQEN----SPFLPDPASDFYYRYEEDIALAAEHGLQALRLSISWVRIFPDIDGDANVLAVHYYHRVFQSCLKHNVIPFVSLHHFDSPQKMLETG-DWLNRENIDRFIRYARFCFQEFTE-VKHWFT 161          
The following BLAST results are available for this feature:
BLAST of CX287917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
LACG_STRPJ7.510e-1940.526-phospho-beta-galactosidase OS=Streptococcus pneu... [more]
LACG_STRA37.510e-1939.666-phospho-beta-galactosidase OS=Streptococcus agal... [more]
LACG_LACAC7.510e-1940.356-phospho-beta-galactosidase OS=Lactobacillus acid... [more]
LACG2_STRR67.510e-1940.526-phospho-beta-galactosidase 2 OS=Streptococcus pn... [more]
LACG2_STRPN7.510e-1940.526-phospho-beta-galactosidase 2 OS=Streptococcus pn... [more]
LACG_STAHJ9.809e-1937.936-phospho-beta-galactosidase OS=Staphylococcus hae... [more]
LACG_STRS72.185e-1839.666-phospho-beta-galactosidase OS=Streptococcus equi... [more]
LACG_STREM2.185e-1839.666-phospho-beta-galactosidase OS=Streptococcus equi... [more]
BGLA_ECOLI1.850e-1737.176-phospho-beta-glucosidase bglA OS=Escherichia col... [more]
LACG1_STRR64.556e-1634.336-phospho-beta-galactosidase 1 OS=Streptococcus pn... [more]

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Properties
Property NameValue
Genbank descriptionC01014G07SK Veg1 Citrus clementina cDNA clone C01014G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287917 ID=CX287917; Name=CX287917; organism=Citrus clementina; type=EST; length=410bp
TTCGGCACGAGGATTTGGGATGTCTTTGCTAAGAAGCCCGGAATTGTTGC
CAATAATGCCACCGGGGATGTGTCCGTGGACCAATATCACCGTTACAAAG
AGGATGTTGATATCATGGCAAATTTGAATTTTGATGCATACCGGTTCTCA
ATTTCCTGGTCCAGAATTTTCCCATATGGAACTGGGAAAGTAAATTGGAA
GGGAGTTGCATACTACAATCAGCTGATCAACTACTTGCTCAAAAGAGGTA
TTACTCCATATGCAAATCTTTATCACTATGATCTTCCTGAAGCTCTCGAG
AAGAAGTACATTGGATTGCTCAGTAAGAGAGTAGTGAAAGACTTTGCTGA
TTACGCTGACTTTTGCTTTAAGACATTTGGAGACAGAGTAAAGAATTGGA
TGACATTTAA
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