CX287957

Overview
NameCX287957
Unique NameCX287957
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATK_BOVIN (Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36
Identity = 77/170 (45.29%), Postives = 104/170 (61.18%), Query Frame = -2
Query:  201 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 704
            LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY+ GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  162 LSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36
Identity = 82/175 (46.86%), Postives = 112/175 (64.00%), Query Frame = -2
Query:  198 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 704
            LSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG+++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         CGIA   SYP+
Sbjct:  176 LSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVA-NQPVSVAIEAGGRAFQLYSSGIFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36
Identity = 77/170 (45.29%), Postives = 103/170 (60.59%), Query Frame = -2
Query:  201 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 704
            LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V P+SVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  163 LSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 328          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36
Identity = 78/174 (44.83%), Postives = 103/174 (59.20%), Query Frame = -2
Query:  195 LSEQQLVDCA--QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVV 704
            LS Q LVDC+  + + N+GC GG  ++AF+YI  NGG++ + +YPY   D  C ++S+N        + +  G ED L+ AV    PVSV  +     F FYKSGVY    C     +VNH V+ VGYG  DG  YWL+KNSWG N+GD GY +M    KN CGIA+  SYP +
Sbjct:  170 LSAQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG---NVNHGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36
Identity = 83/177 (46.89%), Postives = 107/177 (60.45%), Query Frame = -2
Query:  195 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 704
            LSEQ LVDC++   NQGCNGGL   AF+Y+K NGGLDTEE+YPY G++   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct:  161 LSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36
Identity = 85/177 (48.02%), Postives = 106/177 (59.89%), Query Frame = -2
Query:  195 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 704
            LSEQ LVDC++A  NQGCNGGL   AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  161 LSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36
Identity = 78/170 (45.88%), Postives = 103/170 (60.59%), Query Frame = -2
Query:  201 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 704
            LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G+D  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   +VNHAV+AVGYG++ G  +W+IKNSWGE+WG+ GY  M   K N CGIA  AS+P
Sbjct:  162 LSPQNLVDCVS--ENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSD--NVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 83/181 (45.86%), Postives = 111/181 (61.33%), Query Frame = -2
Query:  180 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPVVA*SAP 704
            LSEQ+LV+C+    N GCNGGL   AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E  LQ AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  YW+++NSWG  WG+ GY +ME   N+    CGIA  ASYP  + + P
Sbjct:  188 LSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVA-HQPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPTKSGANP 363          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 83/176 (47.16%), Postives = 104/176 (59.09%), Query Frame = -2
Query:  195 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 704
            LSEQ LVDC+    N+GCNGGL   AF+Y++ NGGLD+EE+YPY   +  CK++ +         V+I    E  L  AV  V P+SVA +   + F FYK G+Y    C +  MD  H V+ VGYG E    D   YWL+KNSWGE WG  GY KM    +N CGIA+ ASYP V
Sbjct:  161 LSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMD--HGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333          
BLAST of CX287957 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36
Identity = 82/176 (46.59%), Postives = 106/176 (60.23%), Query Frame = -2
Query:  195 LSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 704
            LSEQ LVDC++A  N+GCNGGL   AF Y+K NGGLD+EE+YPY G+D   C +  E         V++    E  L  AV  + P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E       +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  161 LSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSS--KDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333          
The following BLAST results are available for this feature:
BLAST of CX287957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
CATK_BOVIN1.272e-3645.29Cathepsin K OS=Bos taurus GN=CTSK PE=2 SV=2[more]
ORYA_ORYSJ1.662e-3646.86Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CATK_CANFA1.662e-3645.29Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATS_MOUSE2.170e-3644.83Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATL1_PIG2.170e-3646.89Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_BOVIN2.835e-3648.02Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATK_RABIT2.835e-3645.88Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
ORYB_ORYSJ3.702e-3645.86Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CATL1_HUMAN3.702e-3647.16Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_CANFA3.702e-3646.59Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionC01015C03SK Veg1 Citrus clementina cDNA clone C01015C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287957 ID=CX287957; Name=CX287957; organism=Citrus clementina; type=EST; length=738bp
CTCGTGCCGTTTTTTTTTGAACATCAAGCAGCCATGCATTGCTATTGTAG
ATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAACCAT
TCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACT
TGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAAC
TGGGTATGATGCACAAGTTGCAATTCCACACATGTTCTTCCCCATCTCCA
TCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATC
AGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACGACGGC
ATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTC
CACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTCACA
GGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGT
AATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATT
TGCAGACACCATCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGG
CCACCATTGTACTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCATT
GCATCCCTGGTTGTTGAAAGCTTGGGCACAGTCTACAAGCTGCTGTTCTG
ACAAGAGATACCCTTTCCAAGGCCTGGTGGTAGCAGCC
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