CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRT2 (Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rpiA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP+LN +KG GGALL EK+V +K ++ V DESK+V LG KL PVEVVQ + RL F G + R E G ++TD N+IIDL I + V+ G E+ + GVVEHGLF M VI+AGK GV++ Sbjct: 86 EVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDESKMVDQLGAFKL--PVEVVQ----YGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIIDLDL-GKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRT1 (Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rpiA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP+LN +KG GGALL EK+V +K ++ V DESK+V LG KL PVEVVQ + RL F G + R E G ++TD N+IIDL I + V+ G E+ + GVVEHGLF M VI+AGK GV++ Sbjct: 86 EVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDESKMVDQLGAFKL--PVEVVQ----YGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIIDLDL-GKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPS (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisB5) GN=rpiA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.058e-23 Identity = 61/143 (42.66%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 EVD L L+KG GGALLREK+V AAS +V+ADESK V LG K +PVEV+ F ++ F ++G + KLR+GE G ++TD ++I+D + I D + ++ GVVEHGLF+ +A+ V++AG G+ Sbjct: 87 EVDTRLELIKGGGGALLREKIVAAASDRMIVIADESKWVDCLG--KFPLPVEVIPFGLAATRRAIEKAFTQVGAAGQLKLRDGEAGHAFVTDGGHWIVDAHLGR-IPDAPRLAKLLSEIPGVVEHGLFIGIASTVVLAGTEGI 226
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHIEC (Ribose-5-phosphate isomerase A OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rpiA PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVDP L L+KG GGALLREK+V AAS+ +V+ADESKLV LG A+P+EV F + ++ + LG E LR+ +G+ + TD ++IID F I D + +E+ + GVVEHGLF++MA IIAG G Sbjct: 87 EVDPALRLIKGGGGALLREKIVAAASQRMIVIADESKLVETLGA--FALPIEVNPFGLVSTRIAIEKVAARLGLSGELNLRQSGDGE-FTTDGGHHIIDASFGR-IPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHILW (Ribose-5-phosphate isomerase A OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpiA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVDP L L+KG GGALLREK+V AAS+ +V+ADESKLV LG A+P+EV F + ++ + LG E LR+ +G+ + TD ++IID F I D + +E+ + GVVEHGLF++MA IIAG G Sbjct: 87 EVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLGA--YALPIEVNPFGLVSTRIAIEKVAARLGLAGELSLRQSGDGE-FTTDGGHHIIDASFGR-IPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHIE6 (Ribose-5-phosphate isomerase A OS=Rhizobium etli (strain CIAT 652) GN=rpiA PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.572e-22 Identity = 65/142 (45.77%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVDP L L+KG GGALLREK+V AAS+ +V+ADESKLV LG A+P+EV F + ++ + LG E LR+ +G+ + TD ++IID F I D + +E+ + GVVEHGLF++MA IIAG G Sbjct: 87 EVDPALRLIKGGGGALLREKIVAAASERMIVIADESKLVDTLGA--YALPIEVNPFGLVSTRIAIEKVAARLGLSGELSLRQSGDGE-FTTDGGHHIIDASFGR-IPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRA3 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype III GN=rpiA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP+ N +KG GGALL EK+V +K ++ V DESKLV LG KL PVEVV ++ RL +F+ G RE E G +ITD NYIIDL + I+D E+ GVVEHGLF M VI+AGK G+++ K Sbjct: 86 EVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVV----RYGSERLFRVFKSKGYCPSFRETE-GDRFITDMGNYIIDLDLK-KIEDPKQLANELDHTVGVVEHGLFNSMVNKVIVAGKNGLDILEK 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_NITHX (Ribose-5-phosphate isomerase A OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpiA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 57/145 (39.31%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKL--REGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+DP+LNL+KG GGALLREK+V AAS+ +V+ADE+K V+GLG + +P+EV+ F + + F + G ++ R+G +G ++TD ++I D + I D + + GVVEHGLF+ +A ++AG G+ V Sbjct: 87 EIDPDLNLIKGGGGALLREKIVAAASERMIVIADETKWVAGLG--RFPLPIEVIPFGLAATRRAIAEAFTKAGASGQMVVRKGPDGLAFVTDGGHWIFDAHL-GQIPDASHLAGLLNPIPGVVEHGLFIGLARVAMLAGAQGIRV 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACAN (Ribose-5-phosphate isomerase A OS=Bacillus anthracis GN=rpiA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22 Identity = 57/142 (40.14%), Postives = 85/142 (59.86%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK + + + LGC+ LR +N + +ITDN N IID F I + + GVVE GLF++M + II K G++ Sbjct: 84 EIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWK----QTESKIQSLGCQTTLRL-KNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRA5 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype V GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP+ N +KG GGALL EK+V +K ++ V DESKLV LG KL PVEVV ++ RL +F+ G RE E G +ITD NYIIDL + I+D E+ GVVEHGLF M VI+AGK G+++ K Sbjct: 86 EVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVV----RYGSERLFRVFKSKGYCPSFRETE-GDRFITDMGNYIIDLDLK-KIEDPKQLANELDHTVGVVEHGLFNGMVNKVIVAGKNGLDILEK 223 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |