CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRE4 (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. equi (strain 4047) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 63/143 (44.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD N +KG G ALL EK+V +K ++ V DESKLV LG KL PVEVVQ + RL +F G + R + K ITD N+IIDL I++ G + + GVVEHGLF M VI+AG+ GV V Sbjct: 86 EVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLGAFKL--PVEVVQ----YGADRLFRVFERAGYKPSFRM-KGDKRLITDMQNFIIDLNLGC-IENPCEFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAGVTV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PROMP (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP+ L+KG G +REK+V + + ++V DESKLV L +PVEV+ WK +++D+ E+ + LR + P +TD N I+D+ F+ I+D I + GV+E+GLF+D+A V++ Sbjct: 84 EVDPDFQLIKGGGACHVREKLVASKANKLLIVIDESKLVQNL-NQVFPLPVEVMPSAWK----QVKDIISEMSGVSNLRMATKKAGPVVTDQGNLILDVLFDAGIRDPKDLEMRINNIPGVLENGLFVDLADKVLV 214
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_METTH (Ribose-5-phosphate isomerase A OS=Methanobacterium thermoautotrophicum GN=rpiA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.598e-17 Identity = 54/145 (37.24%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLR--EGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP+LNL+KG G A EK+V++++ SF+V+ DESKLV LG +PVEV+ + ++L+ +G +R EG++G P +TDN N+++D F I D + + + + GVVE+G+F +A VI G+++ Sbjct: 88 EVDPDLNLIKGGGAAHTLEKIVDSSAASFIVIVDESKLVERLGA--FPLPVEVIPAACRPVKLKLE----SMGASVNIRSSEGKDG-PVVTDNGNFVLDAAFGV-IDDPGAMESRLNNIPGVVENGIFAGIADMVIAGTSEGLKI 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRS7 (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 63/143 (44.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD N +KG G ALL EK+V +K ++ V DESKLV LG KL PVEVVQ + RL +F G + R + K ITD N+IIDL I++ G + + GVVEHGLF M VI+AG+ GV V Sbjct: 86 EVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLGAFKL--PVEVVQ----YGADRLFRVFERAGYKPSFRM-KGDKRLITDMQNFIIDLDLGC-IENPFDFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAGVTV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STREM (Ribose-5-phosphate isomerase A OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 63/143 (44.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD N +KG G ALL EK+V +K ++ V DESKLV LG KL PVEVVQ + RL +F G + R + K ITD N+IIDL I++ G + + GVVEHGLF M VI+AG+ GV V Sbjct: 86 EVDKAFNGIKGGGAALLMEKIVATPTKEYIWVVDESKLVDHLGAFKL--PVEVVQ----YGADRLFRVFERAGYKPSFRM-KGDKRLITDMQNFIIDLDLGC-IENPCEFGRLLDQTVGVVEHGLFNGMVDKVIVAGQAGVTV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOSK (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFR---ELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E D + NL+KG G ALL+EK+V AS VV+AD +K V+ LG +PVEV+ F W+ + +++ LG E LR + P +TD NYI+DL+ + I + G + ++ GVVE+GLF+D+ V++ G Sbjct: 93 EFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLGA--FPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDA-PLLTDEKNYILDLHLKR-IGEPRKLGLALNQIAGVVENGLFIDICDTVVVGHGDG 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS1 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 54/143 (37.76%), Postives = 82/143 (57.34%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFR---ELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E D + NL+KG G ALL+EK+V AS VV+AD +K V+ LG +PVEV+ F W+ + +++ LG E LR + P +TD NYI+DL+ + I + G + ++ GVVE+GLF+D+ V++ G Sbjct: 93 EFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLGA--FPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDA-PLLTDEKNYILDLHLKR-IGEPRQLGLALNQIAGVVENGLFIDICDTVVVGHGDG 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_METB6 (Ribose-5-phosphate isomerase A OS=Methanoregula boonei (strain 6A8) GN=rpiA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 56/141 (39.72%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMA--TAVIIAGK 644 + DP+ L+KGRG A+ REK V +A+ F+VV DE+K+V L G +PVE + F K L +L R LGC +RE + P ITDN N+I+D FE I D I + GV+E GLF + T +I+ + Sbjct: 92 QADPQFRLIKGRGAAITREKCVASAAFRFIVVVDEAKMVKKLAG---VVPVETLPFATKTALAQL----RGLGCRPFIREAVKKDGPVITDNGNFIVDCQFE-EIPDPALLEAGIAAIPGVIESGLFTRLTGNTTIIVGNE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LACLM (Ribose-5-phosphate isomerase A OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpiA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17 Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEA---KLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 E+D LN +KG G ALL EK+V SK ++ + DESKL LG K +PVEV+ + + LF+E A R E G+ ITD ++IIDL+ I++ E+ + GVVEHGLF M VI+AG GV++ S+ Sbjct: 86 EIDSHLNGIKGGGAALLMEKIVATYSKDYIWIVDESKLSENLGSFK--VPVEVITY-------GSEQLFKEFERAAYAPTWRLNEEGEKLITDMQHFIIDLHI-AKIENPQKLADELDLMVGVVEHGLFNGMVKKVIVAGSDGVKIISQ 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_THISH (Ribose-5-phosphate isomerase A OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=rpiA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 63/161 (39.13%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 G+ ++D + LP+ + E + EL+L+KG GGAL REK+V AAS FV +ADESKLV LG +PVEV+ + L +LG + LREG + TDN N I+D++ I D V+ I +L GVV G+F V+I G G Sbjct: 64 GIQVMDLNTAGQLPLYVDGADESNAELHLIKGGGGALTREKIVAAASDKFVCIADESKLVDVLGA--FPLPVEVIPMARAYVAREL----TKLGGQPVLREG-----FTTDNGNVILDVH-NLQISDPVAMEDHINQLPGVVTVGIFAQRPADVLILGSAG 212 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |