CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_THEEB (Ribose-5-phosphate isomerase A OS=Thermosynechococcus elongatus (strain BP-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 53/136 (38.97%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP NL+KG G A REK+V++ ++ F+VV D SKLV L GS +PVEV+ F + + + LG E +LR G + P +TD N+++D+ F+ I D I + GVVE+GLF+++A +++ Sbjct: 92 EVDPAKNLIKGGGAAHTREKIVDSLAEQFLVVVDSSKLVQKL-GSTFPVPVEVLPFA----VAPVTRALKALGGEPELRMGVKKDGPVVTDQGNFVLDVRFD-DIPDPAELEKAINNIPGVVENGLFVNVADVILV 221
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LISIN (Ribose-5-phosphate isomerase A OS=Listeria innocua GN=rpiA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVK 662 E++ +KG GGALLREKMV AS + V E KLV+ LG K +P+EV+ F WK +++ + G E LR+ +G+ Y T+N NYI+D+ +T + + ++ + GV+EHGLFL +II GK E++ Sbjct: 85 EINQAFQGIKGGGGALLREKMVAQASSKNIWVVGEEKLVTELG--KFPLPLEVIPFGWK----QIKRMLENDGVETTLRKQSSGEIYETNNGNYILDIINQT-FTNPEAWHEKLAGIPGVLEHGLFLHYVD-IIICGKASGEIE 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SYNPW (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain WH7803) GN=rpiA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 51/136 (37.50%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP L+KG G ++EK+V A + F+VV D +KLV L L +PVEV+ W V++ + +G +A+LR P +TD N ++D+ FE I D S EI + GV+E+GLF+++A V++ Sbjct: 91 EVDPAFQLIKGGGACHVQEKLVAARADRFIVVVDSTKLVERLNLGFL-LPVEVLPGAW----VQISQQLKAMGGDAELRMATRKAGPVVTDQGNLVLDVRFEGGIADPASLEKEINNIPGVLENGLFVNLADEVLV 221
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS5 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpiA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDL---FRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E D E NL+KG G ALL+EK+V AS +V+AD +K V+ LG +PVEV+ F W+ + +++ LG E LR P +TD NYI+DL+ T I + ++ GVVE+GLF+D+ V++ G Sbjct: 93 EFDSEFNLIKGGGAALLQEKIVATASDRMIVIADAAKEVAQLGA--FPLPVEVIPFGWQSTRMLIEEALIGLDVLGREVTLRRSGEA-PLLTDEKNYILDLHL-TRIGHPRQLALTLNQIAGVVENGLFIDICDTVVVGHGDG 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ANAVT (Ribose-5-phosphate isomerase A OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpiA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 51/136 (37.50%), Postives = 83/136 (61.03%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP+ NL+KG G A REK+V+ + F+VV D KLV L GS A+PVEV+ + + + ++LG + +LR G + P ITD N+++D+ F++ I D V+ + + GV+E+G+F++ A V++ Sbjct: 94 EVDPQKNLIKGGGAAHTREKVVDYLANQFIVVVDSGKLVDRL-GSVFAVPVEVIPMA----ITPVTNAIKQLGGKPELRMGVKKAGPVITDQGNFVLDVRFDS-IDDPVNLEKILNNIPGVLENGIFVNCADIVLV 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA2_YERPS (Ribose-5-phosphate isomerase A 2 OS=Yersinia pseudotuberculosis GN=rpiA2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCE--AKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 E+D N++KG G LL EK++ ASK + + DE+K+V+ LG + +PVE+V F WK R++ + E G +R G P ITD+ N+I+D + I E+ ++ GVVE+GLF AT +++ Sbjct: 90 EIDRRFNMIKGGGACLLWEKIIAHASKRMICICDETKIVNCLG--QFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFILDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGMVV 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA2_YERPE (Ribose-5-phosphate isomerase A 2 OS=Yersinia pestis GN=rpiA2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCE--AKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 E+D N++KG G LL EK++ ASK + + DE+K+V+ LG + +PVE+V F WK R++ + E G +R G P ITD+ N+I+D + I E+ ++ GVVE+GLF AT +++ Sbjct: 90 EIDRRFNMIKGGGACLLWEKIIAHASKRMICICDETKIVNCLG--QFPLPVEIVPFAWKQTERRVERVLAEQGLHHVPIIRRMGGGHPVITDSGNFILDCHCGAIITAPEPLEIELNRIPGVVENGLFTREATGMVV 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PROM1 (Ribose-5-phosphate isomerase A OS=Prochlorococcus marinus (strain NATL1A) GN=rpiA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGE-NGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP+ L+KG G ++EK+V A +K F+VV D +KLV L +PVEV+ WK ++Q LG E LR + P +TD N I+DL F I T+I + GV+E+GLF+++ V++ GK +V Sbjct: 90 EVDPKFQLIKGGGACHVQEKLVAALAKKFIVVVDSTKLVEKL-NLDFKLPVEVLPSAWK----QVQKTLINLGGEGNLRMAQKKAGPIVTDQGNLILDLTFRNGIDQPELLETQINNIPGVLENGLFVNLTDEVLV-GKVESDV 227
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ENTFA (Ribose-5-phosphate isomerase A OS=Enterococcus faecalis GN=rpiA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.684e-16 Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E+ + +KG G ALL EK+V SK + + D+SK+V LG +PVEVV + + +L LF E G LR G+ ITD ++IIDL+ E I D + G+ + L GVVEHGLFL+M + VI+ + G Sbjct: 85 EISADFQGIKGGGAALLFEKIVATYSKKCIWIVDKSKMVDDLGA--FPLPVEVVPYGSR----QLVHLFEEKGYHPTLRLNAAGETLITDGGHHIIDLHLE-KITDPEALGSYLDNLVGVVEHGLFLNMVSMVIVGYEDG 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_THIDA (Ribose-5-phosphate isomerase A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 65/164 (39.63%), Postives = 89/164 (54.27%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 G+ +LD S L V + E+ ++KG GGAL REK+V A SK FV +AD+SKLV LG K +PVEV+ L +LG + +LREG + TDN N I+D++ I D VS T I ++ GVV +GLF V++ G TGV+ Sbjct: 63 GIQVLDLNSVGELEVYVDGADEITQHFAMIKGGGGALTREKIVAACSKQFVCIADDSKLVDVLG--KFPLPVEVIPMARSHVARELV----KLGGQPRLREG-----FTTDNGNVILDVH-NLSIIDPVSLETAINQIVGVVTNGLFARRGADVLLLGTSTGVK 214 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |