CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SYNS3 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain CC9311) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 50/136 (36.76%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP L+KG G ++EK+V ++ F+VV D +KLV L L +PVEV+ W V++Q + +G A+LR P +TD N ++D+ FE I D ++ +I L GV+E+GLF+++A V++ Sbjct: 91 EVDPSFQLIKGGGACHVQEKLVADRAERFIVVVDSTKLVRCLNLDFL-LPVEVLPGAW----VQVQSRLKSMGGVAELRMATRKAGPVVTDQGNLVLDVRFENGISDPIALERDINNLPGVLENGLFVNLADEVLV 221
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LACJO (Ribose-5-phosphate isomerase A OS=Lactobacillus johnsonii GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 60/140 (42.86%), Postives = 76/140 (54.29%), Query Frame = 3 Query: 234 VDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFE-TPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 VD L+ +KG GGAL EK V SK + + DESKLV L G +PVEV+ + N R F G + + R + GK Y+T NYIIDL + TP+ G++ + GVVEHGLFLDM VIIA G Sbjct: 93 VDDNLDGIKGGGGALTLEKNVAINSKKIIWIVDESKLVHHLSG--FPLPVEVLPVSAEQNFKR----FEAEGLKPQWRLNDEGKRYVTHYGNYIIDLAADPTPVPHGLA--DYLDHTVGVVEHGLFLDMCDEVIIAHSDG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_DICDI (Ribose-5-phosphate isomerase OS=Dictyostelium discoideum GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGS-KLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 G+ L D T L + + EVD + NL+KG GG L+EK+V +SK V+VAD +K + LG + K +P+EVV + + +L+ L + ++ + G P +TDN N+IID F P+ + +I + GVVE GLF++M T + G+T K K Sbjct: 65 GLELSDLSRTPELDITIDGADEVDKDFNLIKGGGGCQLQEKIVAYSSKKLVIVADHTKESTELGENWKKGIPIEVVPMAYVPVMKKLESSSFSLTPKLRMAVNKAG-PVVTDNGNFIIDAQFSKPLSNIPQLAIDIKMIPGVVETGLFVNM-TKIAYFGQTDGTCKVK 230
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CAUCR (Ribose-5-phosphate isomerase A OS=Caulobacter crescentus GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 57/142 (40.14%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC-EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 E+ P L+L+KG G ALLREK+V AS VV+AD +K V LG K +P+EVV+F RL D+ E +LR E G +TD N I D+ I+D + + + GVV+HGLFLD+A ++ GV Sbjct: 85 EIGPGLSLIKGGGAALLREKLVWEASTRCVVIADAAKRVPALG--KFPLPIEVVRFGHVHTGYRLADIAAEFDLPPPRLRTAERGM-VVTDGGNLIYDM-ASGKIEDPTALAAALKSVTGVVDHGLFLDLADEALVGTDEGV 222
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CAUCN (Ribose-5-phosphate isomerase A OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 57/142 (40.14%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC-EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 E+ P L+L+KG G ALLREK+V AS VV+AD +K V LG K +P+EVV+F RL D+ E +LR E G +TD N I D+ I+D + + + GVV+HGLFLD+A ++ GV Sbjct: 85 EIGPGLSLIKGGGAALLREKLVWEASTRCVVIADAAKRVPALG--KFPLPIEVVRFGHVHTGYRLADIAAEFDLPPPRLRTAERGM-VVTDGGNLIYDM-ASGKIEDPTALAAALKSVTGVVDHGLFLDLADEALVGTDEGV 222
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CANAL (Ribose-5-phosphate isomerase OS=Candida albicans GN=RKI1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGS-KLAMPVEVVQFCWKFNLVRLQDLFRELGCE-AKLREGENGK--PYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG-VEVKSK 668 EVDP+LNL+KG G L +EK+V A++K FVVVAD K LG S + +P+E+V + +Q+L ++LG + LR+G K P ITDN N+++D F E I + +I L GVVE GLF +MA + G V V SK Sbjct: 115 EVDPQLNLIKGGGACLFQEKLVAASAKKFVVVADYRKKSDKLGQSWRQGVPIEIVPNSYS---KIIQELSKKLGAKNVDLRQGGKAKAGPIITDNNNFLLDADFGEIEIDNVGKLHEQIKLLVGVVETGLFTNMANKAYFGEEDGSVSVWSK 263
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ANASP (Ribose-5-phosphate isomerase A OS=Anabaena sp. (strain PCC 7120) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 51/136 (37.50%), Postives = 82/136 (60.29%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP NL+KG G A REK+V+ + F+VV D KLV L GS A+PVEV+ + + + ++LG + +LR G + P ITD N+++D+ F++ I D V+ + + GV+E+G+F++ A V++ Sbjct: 94 EVDPHKNLIKGGGAAHTREKVVDYLANQFIVVVDSGKLVDRL-GSVFAVPVEVIPMA----ITPVTNAIKQLGGKPELRMGVKKAGPVITDQGNFVLDVRFDS-IDDPVNLEKILNNIPGVLENGIFVNCADIVLV 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOS4 (Ribose-5-phosphate isomerase A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFR---ELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E D + NL+KG G ALL+EK+V AS VV+AD +K V+ LG +PVEV+ F W+ + +++ LG E LR + P +TD NYI+DL+ + I + + ++ GVVE+GLF+D+ V++ G Sbjct: 93 EFDADFNLIKGGGAALLQEKIVATASDRMVVIADAAKEVAHLGA--FPLPVEVIPFGWQSTKMLIEETLEGMDVLGREVTLRLSGDA-PLLTDEKNYILDLHLKR-IGEPRPLALALNQIAGVVENGLFIDICDTVVVGHGDG 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_METEP (Ribose-5-phosphate isomerase A OS=Methylobacterium extorquens (strain PA1) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 60/143 (41.96%), Postives = 77/143 (53.85%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD L L+KG G ALLREK+V AS+ VV+AD SK V LG +PVEV F ++ GC E R +G P +TD + I+DL P + +SAG + + GVVEHGLFL +A A I+A G Sbjct: 87 EVDGSLRLIKGGGAALLREKIVAVASRRMVVIADASKHVETLGA--FPLPVEVNLFGIGATTRAVEAAVARAGCTGETVRRHDASGAPLLTDGGHAILDLRLGRIPDPEALSAG--LWAVPGVVEHGLFLGIADAAILAAAEG 225
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_METC4 (Ribose-5-phosphate isomerase A OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKL--REGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD L L+KG G ALLREK+V AS+ VV+AD SK V LG +PVEV F ++ GC ++ R +G P +TD + I+DL P + +SAG + + GVVEHGLFL +A A I+A G Sbjct: 87 EVDGSLRLIKGGGAALLREKIVAVASRRMVVIADASKHVETLGA--FPLPVEVNLFGIGATTRAVEAAVARAGCTGEIVRRHEASGAPLLTDGGHAILDLRLGRIPDPEALSAG--LWAVPGVVEHGLFLGIADAAILAAAEG 225 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |