CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BARBK (Ribose-5-phosphate isomerase A OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENG-KPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E+ P + L+KG GGALLREK+V AAS +++ADE+K+V LG A+P+ V QF ++ + + LG K+ NG P+ TD+ ++I D + ++ + + + ++ GV+EHGLF+ +A+ IIA G Sbjct: 87 EIGPNMTLIKGGGGALLREKIVAAASHEMLIIADETKVVKTLGA--FALPIAVNQFGLSVTRSAIEKMAKGLGLSGKVTLRMNGDNPFKTDDGHFIFDASWGHIVQPKLLSNA-LFEIPGVIEHGLFVGLASRSIIAMADG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BIFAA (Ribose-5-phosphate isomerase A OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rpiA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 56/143 (39.16%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD N +KG G ALL EK+V S V + DESK+V +G K +PVEV+ F ++ F G + LR NG+P TD NY++DL+ E I ++ GVVEHGLFL+M VI+ G V Sbjct: 91 EVDKNFNGIKGGGAALLWEKIVATNSNKIVWIVDESKVVDTIG--KFPLPVEVI----PFGAGQVVKKFEAKGYKPVLRLDANGEPVRTDENNYVVDLHLER-IDHPQELAQDLITTVGVVEHGLFLNMVDQVIVGDPNGPRV 226
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BARHE (Ribose-5-phosphate isomerase A OS=Bartonella henselae GN=rpiA PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 50/137 (36.50%), Postives = 81/137 (59.12%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENG-KPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIA 638 E+ PE+ L+KG GGALL EK+V +AS++ V+ADE+K+V LG A+P+EV F + ++ LG ++ NG P+ TD ++I D ++ ++ + + + + GVVEHGLFL +A+ I+A Sbjct: 87 EIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTLGA--FALPIEVNPFGIHATRIAIEKAADNLGLSGEITLRMNGDDPFKTDGGHFIFDAFWGRILQPKLLSEALLA-IPGVVEHGLFLGLASRAIVA 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PICST (Ribose-5-phosphate isomerase OS=Pichia stipitis GN=RKI1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGS-KLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGK--PYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMA 620 EVDP LNL+KG G L +EK+V A++K+FVVVAD K LG K +P+E+V + +QDL + LR+G + K P ITDN N+++D F IKD + +I L GVVE GLF MA Sbjct: 92 EVDPALNLIKGGGACLFQEKLVAASAKTFVVVADYRKKSDNLGIQWKQGVPIEIVPNSY---AKVIQDLKKLGAITVNLRQGGSAKAGPIITDNNNFLLDADFGA-IKDPKALHDQIKALVGVVETGLFTSMA 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SYNP2 (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpiA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 52/136 (38.24%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP+ NL+KG G A REK+V+A + FVVV D KLV L GS +PVEV+ + + LG + +LR G + P +TD N ++DL F I D + +I + GV+E+GLF+ +A +++ Sbjct: 90 EVDPQKNLIKGGGAAHTREKVVDALANKFVVVVDSGKLVDRL-GSTFLLPVEVIPMA----ITPVMRQLEALGGKPELRMGVKKAGPVVTDEGNLVVDLKF-AGIDDPATLEQKINNIPGVLENGLFVGVADVILV 219
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SYNY3 (Ribose-5-phosphate isomerase A OS=Synechocystis sp. (strain PCC 6803) GN=rpiA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP+ NL+KG G A REK+V+A +++F+VV D KLV L GS +PVEV+ L + +LG + +LR G + P +TD N +ID+ F+ I + I L GV+E+GLF+ +A +++ Sbjct: 93 EVDPQKNLIKGGGAAHTREKIVDALAETFLVVVDSGKLVDKL-GSTFLLPVEVIPMA----LTPVMRALAKLGGKPELRMGVKKAGPVVTDQGNLVIDVKFDA-ITNPAELEKTINNLPGVLENGLFVGVADVILV 222
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ROSDO (Ribose-5-phosphate isomerase A OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpiA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRE---LGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIA-GKTGVEVK 662 E D NL+KG GGALL EK+V A+S VV+AD K V LG +P+EV+ F + + + LG ++ LR + KP++TD N+IIDL+ + I D + ++ GVVE+GLF+D+ V++ G VEV+ Sbjct: 93 EFDGAFNLIKGGGGALLHEKVVAASSDRMVVIADVGKEVETLGA--FPLPIEVIPFGLQTTHALVDETLVSMDVLGRDSSLRM-DGDKPFVTDEGNHIIDLHLKR-IGDARQLALTLNQVPGVVENGLFIDICDTVVLGFGDGKVEVR 236
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_NITMU (Ribose-5-phosphate isomerase A OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rpiA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 56/161 (34.78%), Postives = 94/161 (58.39%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 G+ ++D + LP+ + E+ P L+++KG GGAL REK+V A +K F+ +AD+SKLV LG K +PVEV+ + ++ R ++ R LG + LR+G + TDN N I+D++ I + + TE+ ++ G+V +GLF +++ G G Sbjct: 64 GIEVMDLNNVDELPLYVDGADEITPHLHMIKGGGGALTREKIVAAVAKKFICIADQSKLVDVLG--KFPLPVEVIPMA-RGHVAR--EIVR-LGGQPMLRQG-----FTTDNGNVILDVH-ALQILNPIELETELNQITGIVTNGLFARRPADLLLLGDEG 212
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CYAP4 (Ribose-5-phosphate isomerase A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rpiA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 53/136 (38.97%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVDP+ NL+KG G A REK+V+A + F+VV D SKLV L GS +PVEV+ L + LG E +LR G + P ITD N ++D+ F I D + + GVVE+G+F+++A +++ Sbjct: 94 EVDPQKNLIKGGGAAHTREKVVDALADLFIVVVDSSKLVDQL-GSTFPVPVEVLPMA----LTPVMRAVTRLGGEPQLRMGVKKDGPVITDQGNMVLDVKF-AAIPDPAELEKTLNNIPGVVENGIFVNLAKVILV 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BARQU (Ribose-5-phosphate isomerase A OS=Bartonella quintana GN=rpiA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGK-PYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E+ PE+ L+KG GGAL REK+V AAS++ +V+ADE+K+V LG A+P+EV F ++ + +LG ++ NG+ P+ TD ++I D ++ ++ + + + + GVVEHGLF +A+ I+A G Sbjct: 87 EIGPEMTLIKGGGGALWREKIVAAASRAMLVIADETKVVKTLGA--FALPIEVNPFGMPATRRLIEKVADDLGLSGEIILRMNGENPFKTDGGHFIFDAFWGCILQPRLLSEALLA-IPGVVEHGLFWGLASRAIVAMADG 224 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |