CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRA1 (Ribose-5-phosphate isomerase A OS=Streptococcus agalactiae serotype Ia GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP+ N +KG GGALL EK+V +K ++ V DESKLV LG KL PVEVV ++ RL +F+ G RE E G +ITD NYIIDL + I+D E+ GVVEHGLF M VI+AGK G+++ K Sbjct: 86 EVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGAFKL--PVEVV----RYGSERLFRVFKSKGYCPSFRETE-GDRFITDMGNYIIDLDLK-KIEDPKQLANELDHTVGVVEHGLFNGMVNKVIVAGKNGLDILEK 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CHLSY (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 EVDP+L+L+KG GGALLREKMV AS+ ++ D+SKL L G++ A+P+EVV F W+ L+ G +LR +G+P+ TD N I+D + P+ D + ++ G+VEHGLF+ +AT + +AG GV+ Sbjct: 92 EVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWRATARWLE----AQGGTVQLRLRADGQPFRTDQGNLILD-WKCGPLNDPAALAAQLSARAGIVEHGLFIGLATDLFVAGPDGVQ 227
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CHLAA (Ribose-5-phosphate isomerase A OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 59/142 (41.55%), Postives = 88/142 (61.97%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 EVDP+L+L+KG GGALLREKMV AS+ ++ D+SKL L G++ A+P+EVV F W+ L+ G +LR +G+P+ TD N I+D + P+ D + ++ G+VEHGLF+ +AT + +AG GV+ Sbjct: 92 EVDPQLSLIKGGGGALLREKMVAQASRRVAIIVDDSKLSPAL-GTRFALPLEVVDFGWRATARWLE----AQGGTVQLRLRADGQPFRTDQGNLILD-WKCGPLNDPAALAAQLSARAGIVEHGLFIGLATDLFVAGPDGVQ 227
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACHK (Ribose-5-phosphate isomerase A OS=Bacillus thuringiensis subsp. konkukian GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 56/142 (39.44%), Postives = 85/142 (59.86%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK + + + LGC+ LR +N + +ITDN N I+D F I + + GVVE GLF++M + II K G++ Sbjct: 84 EIDSNLQLIKGGGGALLREKIVASSSKELIIIVDESKVVTRLG--TFPLPIEIIPFAWK----QTESKIQSLGCQTTLRL-KNNETFITDNNNMIVDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACCZ (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ZK / E33L) GN=rpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.682e-22 Identity = 57/142 (40.14%), Postives = 85/142 (59.86%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E+D L L+KG GGALLREK+V ++SK +++ DESK+V+ LG +P+E++ F WK + + + LGC+ LR +N + +ITDN N IID F I + + GVVE GLF++M + II K G++ Sbjct: 84 EIDSNLQLIKGGGGALLREKIVASSSKELIIIIDESKVVTRLG--TFPLPIEIIPFAWK----QTESKIQSLGCQTTLRL-KNNETFITDNNNMIIDCIFPNHIPTPSDLHKRLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRPI (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=rpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD + N +KG GGALL EK+V SK ++ V DESKLV LG KL PVEVVQ + ++ F G + RE ++G+ ++TD N+IIDL + I+D + G E+ + GVVEHGLF M VI+AG+ GV++ Sbjct: 86 EVDSQFNGIKGGGGALLMEKIVATPSKEYIWVVDESKLVDKLGAFKL--PVEVVQ----YGAEQIFRRFERAGYKPSFRE-KDGQRFVTDMQNFIIDLALDV-IEDPIVFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQI 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOP5 (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisA53) GN=rpiA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 58/145 (40.00%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+DP LNLVKG GGALLREK+V AAS +V+AD+SKLV LG + +P+EV+ F ++ G E KLR G++G ++TD ++I+D + I D + + G+VEHGLF+ +A++V++A G+ + Sbjct: 87 EIDPALNLVKGGGGALLREKIVAAASGRMIVIADDSKLVETLG--RFPLPIEVIPFGLAATRRAIEQALAVCGIDGELKLRNGKDGHAFVTDGGHWIVDAHLGR-IPDAPRLAGLLSVIPGIVEHGLFIGLASSVVLASPHGIRI 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA1_OCEIH (Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus iheyensis GN=rpiA1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22 Identity = 64/165 (38.79%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVK 662 G+ L D + + L + + EVD +L+KG G AL REK++ A+K FV++ D+SK+V LG + ++PVEV+ F W+ R + +LGC +R E +P +TDN NYI+D F+ I EI + GV+E GLF+DMAT VI+ K + +K Sbjct: 68 GIPLTDFSNVKELDITIDGADEVDANNHLIKGGGAALFREKIIAQAAKEFVIIVDQSKVVETLG--EFSLPVEVLPFSWQ----RTANEISKLGCVPTVRVHEE-EPLVTDNGNYILDCPFKV-IPHPDKLNKEIKSIVGVIETGLFIDMATTVIVGEKDNIYIK 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_DINSH (Ribose-5-phosphate isomerase A OS=Dinoroseobacter shibae (strain DFL 12) GN=rpiA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.975e-22 Identity = 62/143 (43.36%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFREL---GCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E DP LNL+KG GGALL+EK+V AS +V+ D SK V+ LG +PVEV++F W+ +++ + G EA LR ENG PY+TD N+I+DL+ E I + + +L GVVE+GLFLD+ V+I G Sbjct: 93 EFDPTLNLIKGGGGALLQEKIVATASDRMIVITDASKAVATLGA--FPLPVEVIRFGWETTRTLIEETLVNVDVGGREAILRM-ENGMPYVTDEGNFIVDLHLER-IGNPRQVSLVLNQLPGVVENGLFLDICDVVVIGKSDG 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRZJ (Ribose-5-phosphate isomerase A OS=Streptococcus pneumoniae (strain JJA) GN=rpiA PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKS 665 EVD + N +KG GGALL EK+V SK ++ V DESKLV LG KL PVEVVQ + ++ F G + RE ++G+ ++TD N+IIDL + I++ ++ G E+ + GVVEHGLF M VI+AG+ GV++ + Sbjct: 86 EVDSQFNGIKGGGGALLMEKVVATPSKEYIWVVDESKLVEKLGAFKL--PVEVVQ----YGAEQVFRRFERAGYKPSFRE-KDGQRFVTDMQNFIIDLALDV-IENPIAFGQELDHVVGVVEHGLFNQMVDKVIVAGRDGVQIST 222 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |