CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BOVIN (Ribose-5-phosphate isomerase (Fragment) OS=Bos taurus GN=RPIA PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGS-KLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGEN-GKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD +LNL+KG GG L +EK+V + F+V+AD K LG +P+EV+ + + + + ++ G +LR N P +TDN N+I+D F+ + I + GVV+ GLF++MA V + G Sbjct: 118 EVDADLNLIKGGGGCLTQEKIVAGNASRFIVIADFRKDSKNLGDQWHKGIPIEVIPMAY---VPVSRTVTQKFGGVIELRMAVNKAGPVVTDNGNFILDWKFDR-VHKWSEVNIAIKMIPGVVDTGLFINMAERVYFGMQDG 255
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BLOFL (Ribose-5-phosphate isomerase A OS=Blochmannia floridanus GN=rpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 50/144 (34.72%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLD-MATAVIIAGKTGVEV 659 E+D + ++KG GGAL +EK++ A+K F+ + D+SK V+ L G K +PVEV+ + + L C L E NG ITDN N I+D+Y I D I + GVV GLF A +I + G+++ Sbjct: 86 EIDLHMQMIKGGGGALTKEKIIAFAAKKFICIVDDSKQVNIL-GRKGPIPVEVIPMARSV-------VSKSLICLGGLPEYRNG--VITDNGNSILDVY-NMNITDASLLEQRINNIPGVVSVGLFAQRKADIALIGTQKGIKI 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ACTSZ (Ribose-5-phosphate isomerase A OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 47/144 (32.64%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLF-LDMATAVIIAGKTGVEV 659 E++P+ ++KG G AL REK+V + +K+F+ + D SK V L GS +PVEV+ ++ LG + R+G +TDN N I+D++ PI + E+ + GVV +G+F L+ A VI+ G ++ Sbjct: 85 EINPQKMMIKGGGAALTREKIVASLTKNFICIVDSSKQVDVL-GSTFPLPVEVIPMARS----QVARKLVALGGSPEWRQG-----VVTDNGNVILDVH-NFPIMNPPEMEKELNNVAGVVTNGIFALNAANTVIVGTPEGAKI 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA1_YERPS (Ribose-5-phosphate isomerase A 1 OS=Yersinia pseudotuberculosis GN=rpiA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKF---NLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVEV 659 E++ ++ ++KG G AL REK++ A ++ F+ +ADESK V LG K +PVEV+ + L++L L E + +TDN N I+D++ I D ++ +I + GVV GLF + V + G GV+V Sbjct: 85 EINGQMQMIKGGGAALTREKIIAAIARKFICIADESKQVGVLG--KFPLPVEVIPMARSYVARELIKLGGL------------PEYRQNVLTDNGNVILDVH-NLSILDAIALENQINGIAGVVTVGLFANRGADVALIGTANGVKV 216
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA1_YERPE (Ribose-5-phosphate isomerase A 1 OS=Yersinia pestis GN=rpiA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKF---NLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVEV 659 E++ ++ ++KG G AL REK++ A ++ F+ +ADESK V LG K +PVEV+ + L++L L E + +TDN N I+D++ I D ++ +I + GVV GLF + V + G GV+V Sbjct: 85 EINGQMQMIKGGGAALTREKIIAAIARKFICIADESKQVGVLG--KFPLPVEVIPMARSYVARELIKLGGL------------PEYRQNVLTDNGNVILDVH-NLSILDAIALENQINGIAGVVTVGLFANRGADVALIGTANGVKV 216
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SODGM (Ribose-5-phosphate isomerase A OS=Sodalis glossinidius (strain morsitans) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKF---NLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDM-ATAVIIAGKTGVEV 659 S+S A++ L G+ L D +L + + E++ + ++KG G AL REK++ A ++ F+ +AD SKLV LG +PVEV+ + LVR LG R+G +TDN N I+D++ I D V+ +I + GVV GLF A +I + GV++ Sbjct: 51 SSSEASSAKLQSL--GIPLFDLNEVDSLDIYVDGADEINGSMQMIKGGGAALTREKIIAAVARKFICIADSSKLVDVLG--TFPLPVEVIPMARAWVARELVR-------LGGAPVYRQG-----VVTDNGNIILDVH-NLAIMDAVALEEQINNIPGVVTVGLFARRGADVALIGSEQGVKI 216
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SHEPC (Ribose-5-phosphate isomerase A OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 54/173 (31.21%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T L G+ + D S L V + E++ ++++KG G AL REK+V A ++ F+ + D +K V+ LG + +PVEV+ + +L +LG + REG +TDN N I+D+Y I + ++I ++ GVV +GLF V++ G Sbjct: 51 SSSEASTQKMKAL--GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVDNTKQVNILG--EFPLPVEVIPMARSYVARQLV----KLGGDPVYREG-----VVTDNGNVILDVY-NLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PECCP (Ribose-5-phosphate isomerase A OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 E++ + ++KG G AL REK++ A S+ F+ + D SK V LG K +PVEV+ + L +LG + R+G +TDN N I+D++ I D ++ I + GVV GLF + V + G Sbjct: 85 EINGHMQMIKGGGAALTREKIISALSRQFICIVDASKQVDVLG--KFPLPVEVIPMARSYVARELV----KLGGQPVYRQG-----VVTDNGNVILDVH-NLNIMDAIAVENHINGIPGVVTVGLFANRGADVALVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_MARAV (Ribose-5-phosphate isomerase A OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 47/137 (34.31%), Postives = 73/137 (53.28%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 E + L L+KG GGAL REK+V A +K+F+ +ADESK V LG + +PVEV+ + +LG + R+G ++TDN N IID++ I + ++ + GVV +GLF +++ G Sbjct: 89 ETNESLELIKGGGGALTREKIVAAVAKTFICIADESKQVGILG--EFPLPVEVIPMARS----HVGREIVKLGGDPVYRDG-----FVTDNGNIIIDIH-NMDISRPLVVEEKLNNIVGVVTNGLFARRPADLLLLG 213
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURCM (Ribose-5-phosphate isomerase A OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 52/143 (36.36%), Postives = 71/143 (49.65%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D ++ GVV GLF + + + G GVE Sbjct: 89 EIDASGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTPNGVE 224 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |