CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURCH (Ribose-5-phosphate isomerase A OS=Burkholderia cenocepacia (strain HI2424) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D ++ GVV GLF + + + G + GVE Sbjct: 89 EIDAGGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURCC (Ribose-5-phosphate isomerase A OS=Burkholderia cenocepacia (strain MC0-3) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D ++ GVV GLF + + + G + GVE Sbjct: 89 EIDAGGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURCA (Ribose-5-phosphate isomerase A OS=Burkholderia cenocepacia (strain AU 1054) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 52/143 (36.36%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D ++ GVV GLF + + + G + GVE Sbjct: 89 EIDAGGAMIKGGGGALTREKIVASVADTFVCIADASKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIADPRGFEAQVNAWPGVVTVGLFAERGANLCLLGTENGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURA4 (Ribose-5-phosphate isomerase A OS=Burkholderia ambifaria (strain MC40-6) GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 53/143 (37.06%), Postives = 71/143 (49.65%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D +I GVV GLF + + + G GVE Sbjct: 89 EIDASGAMIKGGGGALTREKIVASVADTFVCIADGSKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTQDGAPYITDNGNEIIDVK-GLQIVDPRGFEAQINAWPGVVTVGLFAERGANLCLLGTPNGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BAUCH (Ribose-5-phosphate isomerase A OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rpiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLD-MATAVIIAGKTGVEVKSK 668 E++ + ++KG G AL REK++ AA+ F+ +AD SK V LG L + V + W ++L G K R+G ITDN N I+D+Y I D ++ I + GVV GLF + A +I+ G+E S+ Sbjct: 85 EINSNMQMIKGGGAALTREKVLAAAANKFICIADTSKQVDILGNFPLPIEVIPMAHAWV-----ARELVHLTGGLPKYRQG-----VITDNGNIILDIY-NLKILDAIALEKIINNIPGVVTVGLFANRCADIALISSDLGIEEISR 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SHEB9 (Ribose-5-phosphate isomerase A OS=Shewanella baltica (strain OS195) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T L G+ + D S L V + E++ ++++KG G AL REK+V A ++ F+ + D +K V LG + +PVEV+ + +L +LG + REG +TDN N I+D+Y I + ++I ++ GVV +GLF V++ G Sbjct: 51 SSSEASTQKMKAL--GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVDNTKQVDILG--EFPLPVEVIPMARSYVARQLV----KLGGDPVYREG-----VVTDNGNVILDVY-NLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SHEB8 (Ribose-5-phosphate isomerase A OS=Shewanella baltica (strain OS185) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T L G+ + D S L V + E++ ++++KG G AL REK+V A ++ F+ + D +K V LG + +PVEV+ + +L +LG + REG +TDN N I+D+Y I + ++I ++ GVV +GLF V++ G Sbjct: 51 SSSEASTQKMKAL--GIPVYDLNSVDRLSVYVDGADEINDHMDMIKGGGAALTREKIVAAVAEKFICIVDNTKQVDILG--EFPLPVEVIPMARSYVARQLV----KLGGDPVYREG-----VVTDNGNVILDVY-NLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SHEB5 (Ribose-5-phosphate isomerase A OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T L G+ + D S L V + E++ ++++KG G AL REK+V A ++ F+ + D +K V LG + +PVEV+ + +L +LG + REG +TDN N I+D+Y I + ++I ++ GVV +GLF V++ G Sbjct: 51 SSSEASTQKMKAL--GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVDNTKQVDILG--EFPLPVEVIPMARSYVARQLV----KLGGDPVYREG-----VVTDNGNVILDVY-NLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SHEB2 (Ribose-5-phosphate isomerase A OS=Shewanella baltica (strain OS223) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 54/173 (31.21%), Postives = 89/173 (51.45%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T L G+ + D S L V + E++ ++++KG G AL REK+V A ++ F+ + D +K V LG + +PVEV+ + +L +LG + REG +TDN N I+D+Y I + ++I ++ GVV +GLF V++ G Sbjct: 51 SSSEASTQKMKAL--GIPVYDLNSVDRLSVYVDGADEINDRMDMIKGGGAALTREKIVAAVAEKFICIVDNTKQVDILG--EFPLPVEVIPMARSYVARQLV----KLGGDPVYREG-----VVTDNGNVILDVY-NLKILNPKELESQINEIVGVVTNGLFAKRGADVLLVG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_EXIS2 (Ribose-5-phosphate isomerase A OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = 3 Query: 225 IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLF 608 I ++DP ++KG GGAL REK+V S+ + +AD SK V L G +PVE+ F + ++ R+ + LRE +G+P++TD + I+D+ E ++D E+ L GV+E G F Sbjct: 84 IDQIDPRFRVLKGGGGALFREKVVALMSREILYLADASKFVHHLTG---PLPVEIDAFARPY----VERYLRDKQLDVTLRE-HDGQPFVTDGGHLILDVDLER-VQDVRHFAQELKSLTGVLETGYF 202 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |