CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CRYNE (Ribose-5-phosphate isomerase OS=Cryptococcus neoformans GN=RKI1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 54/152 (35.53%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGS-KLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENG----------KPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD ELN +KG G LREK++ A+ ++++VAD K LG S +P+EVV F + L L +G L G+ G P ++DN N+IID F E ++ +I L GVVE GLF MA A + G Sbjct: 141 EVDNELNSIKGGGACQLREKVLAEAADTWIIVADYRKNSEVLGTSWTKGIPIEVVPFAYAKVLTNL----AHMGSPHVLPNGQPGLSLRMGKMKAGPVVSDNGNFIIDAPFAEELMRQPEELLHKIKMLTGVVEVGLFCGMAKAAYFGNEDG 288
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SALAR (Ribose-5-phosphate isomerase A OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 49/158 (31.01%), Postives = 80/158 (50.63%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 G+H+ D +L + + E++ + ++KG G AL REK++ + ++ F+ +AD SK V LG K +PVEV+ +L +LG + R+G +TDN N I+D+Y I D ++ I + GVV GLF + V + G Sbjct: 64 GIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILG--KFPLPVEVIPMARSAVARQLV----KLGGRPEYRQG-----VVTDNGNVILDVY-GMEILDPIALENAINAIPGVVTVGLFANRGADVALIG 209
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PHOLL (Ribose-5-phosphate isomerase A OS=Photorhabdus luminescens subsp. laumondii GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 48/143 (33.57%), Postives = 73/143 (51.05%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGK-TGVE 656 E++ + ++KG G AL REK++ A +K FV + D SK V LG K +PVEV+ + L +LG K R+ +TDN N I+D++ I D +I ++ GVV GLF + +++ G GVE Sbjct: 85 EINGNMQMIKGGGAALTREKIIAAIAKKFVCIVDASKKVEVLG--KFPLPVEVIPMARAYVARELV----KLGGVPKYRQN-----VVTDNGNVILDVH-NLAILDPAELENKINRISGVVTVGLFANRGADIVLMGTLDGVE 215
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_META3 (Ribose-5-phosphate isomerase A OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 43/135 (31.85%), Postives = 75/135 (55.56%), Query Frame = 3 Query: 231 EVDPE-LNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVI 632 EV+ E LN++KG GG +EK+++ +K +++ DESKLV L G +P+EV+ F + L L L ++ + + G P ITDN N IID++ + + + ++ + GVVE+G+F + ++ Sbjct: 95 EVNKETLNVIKGGGGCHTQEKIIDYCAKELIIIVDESKLVDSL-GENTPVPLEVLPFAYSSVLNEL--LKMNSAPSIRMADKKMG-PVITDNGNMIIDVFID--LNNPEEVEKQLNNIPGVVENGIFTKVDKVIV 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_MANSM (Ribose-5-phosphate isomerase A OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLF-LDMATAVIIAGKTGVEV 659 E++P+ ++KG G AL REK+V + +K+F+ + D SK V L GS +PVEV+ ++ LG + REG ITDN N I+D++ I + + E+ + GVV +G+F L+ A VI+ G ++ Sbjct: 85 EINPQKMMIKGGGAALTREKIVSSLAKNFICIVDSSKQVDIL-GSTFPLPVEVIPMARS----QVARKLVALGGSPEWREG-----VITDNGNVILDVH-NFIIMNPIEMEKELNNVAGVVTNGIFALNAAHTVIVGTPDGAKI 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_HAEI8 (Ribose-5-phosphate isomerase A OS=Haemophilus influenzae (strain 86-028NP) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 E++P+ ++KG G AL REK+V A +K F+ + D SK V L GS +PVEV+ ++ LG + REG +TDN N I+D++ I + V E+ + GVV +G+F V+I G Sbjct: 85 EINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVL-GSTFPLPVEVIPMARS----QVGRKLVALGGAPEYREG-----VVTDNGNVILDVH-NFSILNPVEMEKELNNVAGVVTNGIFALRGADVVIVG 210
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CHLFF (Ribose-5-phosphate isomerase A OS=Chlamydophila felis (strain Fe/C-56) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFL 611 E+DP+L ++KG GGA+ REK++ +S+ +++ADESK V LG K +PVE+ + + L+ +G LR+ G +IT+N NYI D++ ++ ++ G++E G + Sbjct: 91 EIDPQLRMIKGGGGAIFREKILLQSSQRRLILADESKSVKVLG--KFGLPVEISPYGRSSIIAALE----AIGYLGNLRKNSRGGFFITNNGNYIYDIHTPNIYPHPEEDLLKLLQIHGIIEVGFVI 211
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURVG (Ribose-5-phosphate isomerase A OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 G+ + D AL V + E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I + + ++ GVV GLF + + + G + GVE Sbjct: 68 GIKVFDLNEIDALQVYVDGADEIDASGAMIKGGGGALTREKIVASVADTFVCIADGSKRVPVLGA--FPLPIEVVPMA----RTAIGRRVAALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIAEPRAFEAKVNAWPGVVTVGLFAERGANLCLLGTENGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BURCJ (Ribose-5-phosphate isomerase A OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 57/164 (34.76%), Postives = 79/164 (48.17%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG-KTGVE 656 G+ + D AL V + E+D ++KG GGAL REK+V + + +FV +AD SK V LG +P+EVV + LG LR ++G PYITDN N IID+ I D + GVV GLF + + + G + GVE Sbjct: 68 GIKVFDLNEIDALQVYVDGADEIDAGGAMIKGGGGALTREKIVASVADTFVCIADGSKRVPVLGA--FPLPIEVVPMA----RTAIGRRVTALGGVPVLRVTKDGAPYITDNGNEIIDVK-GLQIADPRGFEARVNAWPGVVTVGLFAERGANLCLLGTENGVE 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_AERS4 (Ribose-5-phosphate isomerase A OS=Aeromonas salmonicida (strain A449) GN=rpiA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 56/174 (32.18%), Postives = 90/174 (51.72%), Query Frame = 3 Query: 126 SNSRANTCTKPRLLE-GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAG 641 S+S A+T RL E G+++ D AL V + E++ +++KG G AL REK+V A + F+ + D +K V LG + +PVEV+ ++ + R+LG + REG +TDN N I+D+ IKD + ++ + GVV +GLF V++ G Sbjct: 51 SSSIAST---ERLKEFGINVYDLNDIDALSVYVDGADEINASRDMIKGGGAALTREKIVAAVADKFICIIDNTKTVDVLG--QFPLPVEVIPMAREY----VAREIRKLGGNPEWREG-----VVTDNGNIILDVK-GMAIKDAKALEVQLNGIVGVVTNGLFAHRGADVVLIG 209 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |