CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHIL3 (Ribose-5-phosphate isomerase A OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rpiA PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21 Identity = 64/142 (45.07%), Postives = 87/142 (61.27%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD L L+KG GGALLREK+V AAS+ +V+ADESKLV LG A+P+EV F + ++ + LG E LR+ +G+ + TD ++IID F I D + +E+ + GVVEHGLF++MA IIAG G Sbjct: 87 EVDQALRLIKGGGGALLREKIVAAASERMIVIADESKLVETLGA--FALPIEVNPFGLVSTRIAIEKVAARLGLSGELDLRQSGDGE-FTTDGGHHIIDASFGR-IPDAEALSSELNSIPGVVEHGLFINMAALAIIAGPAG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPB (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain BisB18) GN=rpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E++ LNL+KG GGALLREK+V AAS +V+ADESKLV+ LG + +P+EV F L +++ E G LR+G +G ++TD ++I+D I D S ++ + GVVE+GLF+ +A+ ++AG G+ + Sbjct: 87 EINAALNLIKGGGGALLREKIVAAASDRMIVIADESKLVANLG--RFPLPIEVNSFGLAATLRAIEEACAECGVFGPLSLRKGSDGHAFVTDGGHWIVDAQLGR-IPDAPSLADQLNAIPGVVENGLFIGLASMAVLAGPNGIRI 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PYRAB (Ribose-5-phosphate isomerase A OS=Pyrococcus abyssi GN=rpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGEN-GKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 EVDP LNL+KGRG AL EK++E+ + F+V+ DE KLV L K+ +P+EV+ W+ +V +F EAKLR G N P ITDN N+IID F I D + E+ + GVVE+G+F D+A VI+ K GV+ Sbjct: 89 EVDPNLNLIKGRGAALTMEKIIESRAGMFIVLVDERKLVDYL-CQKMPVPIEVIPQAWR-AIVEELSIF---NAEAKLRMGVNKDGPVITDNGNFIIDAKFPR-IDDPLDMEIELNTIPGVVENGIFADIADIVIVGTKEGVK 225
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRGC (Ribose-5-phosphate isomerase A OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpiA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP N +KG GGALL EK+V +KS++ V DESKLV LG KL PVEVVQ + ++ F G + R+ ++G+ ++TD N+IIDL I++ + E+ + G+VEHGLF M VI+AGK GV+V Sbjct: 86 EVDPNFNGIKGGGGALLMEKVVATPTKSYIWVVDESKLVEKLGAFKL--PVEVVQ----YGAEQVFRRFERAGYKPAFRQ-KDGQRFVTDMKNFIIDLDLGV-IENPIEFARELDHIVGIVEHGLFNQMVDKVIVAGKAGVQV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_AGRRK (Ribose-5-phosphate isomerase A OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpiA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEA--KLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD L L+KG GGALLREK+V A+S+ +V+ADESK+V LG A+P+EV F ++++ LG LR+ E+G ++TD ++IID F I D + + + GVVEHGLF++MAT IIAG +G Sbjct: 87 EVDGALRLIKGGGGALLREKIVAASSQRMIVIADESKVVQTLGA--FALPIEVNPFGLVSTRIQIEKTAARLGLSGALNLRQSEDGN-FMTDGGHFIIDASFGR-IPDAEALSIALNSIPGVVEHGLFINMATLAIIAGPSG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_NITWN (Ribose-5-phosphate isomerase A OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpiA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKL--REGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+DP+LNL KG GGALLREK+V AAS +V+ADE+K V+GLG + +P+EV+ F + ++F + G +L R+ +G ++TD ++I D + I D + + GVVEHGLF+ +A ++AG G+ + Sbjct: 87 EIDPDLNLTKGGGGALLREKIVAAASDRMIVIADETKWVAGLG--RFPLPIEVIPFGLAATRRAITEVFAKAGVSGELAVRKRPDGHAFVTDGGHWIFDAHL-GQIPDASYLAGLLNPIPGVVEHGLFIGLARVAMLAGAEGIRI 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BRUME (Ribose-5-phosphate isomerase A OS=Brucella melitensis GN=rpiA PE=3 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21 Identity = 60/147 (40.82%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLR-EGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVD EL+L+KG GGALLREK+V AAS S +V+AD+SK+V LG + +P+EV +F + ++ + G L ++G P++TD +YI+D F I D + + + GVVEHGLF+++A A IIAG G+ ++ Sbjct: 88 EVDGELSLIKGGGGALLREKIVAAASDSMIVIADQSKVVETLG--RFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHYIVDASFGR-IPDPKTLSDALFAIPGVVEHGLFIELARAAIIAGTDGIRTMNR 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ROSCS (Ribose-5-phosphate isomerase A OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpiA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 63/141 (44.68%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 E+DP L L+KG GGA+LREK+V A++ FVV+A SK V L G + +PVEVV F + RL LG E LR +G P++TD N I+D +F I D + I + GVV HGLFL MA+ +IAG G+ Sbjct: 89 EIDPHLRLIKGLGGAMLREKIVAASAARFVVMASVSKRVERL-GERSPLPVEVVTFGMPLCIRRL----AALGGEPVLRCDHSGAPFVTDEGNLILDCHFGV-IADPEALAAAICAIPGVVAHGLFLGMASLAVIAGPDGI 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHILO (Ribose-5-phosphate isomerase A OS=Rhizobium loti GN=rpiA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLR-EGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 EVDPEL L+KG GGALLREK+V AAS+ +V+AD SK+V LG + +P+EV QF + + + +LG + G+ ++TD ++I+D F I D + + + GVVEHGLF+ +A+ IIAG G++ Sbjct: 87 EVDPELTLIKGGGGALLREKIVAAASQRMIVIADRSKMVETLG--RFPLPIEVNQFGLRATEIAIAKTAADLGLSGPITLRMTGGQAFVTDGGHFILDASFGR-IPDTRALSNALHAIPGVVEHGLFIGLASTAIIAGGDGIQ 226
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PYRFU (Ribose-5-phosphate isomerase A OS=Pyrococcus furiosus GN=rpiA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 65/168 (38.69%), Postives = 97/168 (57.74%), Query Frame = 3 Query: 159 RLLEGMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREG-ENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 R+ G+ +L A+ +A+ EVDP LNL+KGRG AL EK++E + +F+V+ DESKLV L K+ +P+EV+ WK L L +A+LR G + P +T+N N+IID F I D + E+ + GVVE+G+F D+A V++ K GV+ Sbjct: 64 RMESGVPVLSLDQVDAIDIAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDESKLVDYL-CQKMPVPIEVIPAAWKAILEELS----IFNAKAELRMGVKKDGPVVTENGNFIIDAKFPR-IDDPLDMEIELNTIPGVVENGIFADIADIVLVGTKEGVK 225 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |