CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_GLOVI (Ribose-5-phosphate isomerase A OS=Gloeobacter violaceus GN=rpiA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 62/139 (44.60%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 243 ELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EL L+KG GGALLREK+V AAS+ +++ D +KLV L GS +PVEV F W+ L+ LG E LR ++G+ ++TD +YI+D F PI I ++ GVVE GLF+ MA+AVI+A + G+EV Sbjct: 92 ELALIKGLGGALLREKIVAAASERLIIIVDATKLVEQL-GSHGPLPVEVAPFGWQATARALE----RLGAEVNLR-AQHGQAFLTDGGHYILDCRF-GPIARPAELEAAIDRIPGVVESGLFVGMASAVIVADEGGIEV 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BRUSU (Ribose-5-phosphate isomerase A OS=Brucella suis GN=rpiA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLR-EGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVD EL+L+KG GGALLREK+V AAS S +V+AD+SK+V LG + +P+EV +F + ++ + G L ++G P++TD +YI+D F I D + + + GVVEHGLF+ +A A IIAG G+ ++ Sbjct: 88 EVDGELSLIKGGGGALLREKIVAAASDSMIVIADQSKVVETLG--RFPLPIEVNRFGLGATIRAIEAAAVKCGLAGPLNLRLKDGSPFLTDGGHYIVDASFGR-IPDPKTLSDALFAIPGVVEHGLFIGLARAAIIAGTDGIRTMNR 231
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ROSS1 (Ribose-5-phosphate isomerase A OS=Roseiflexus sp. (strain RS-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.922e-20 Identity = 62/141 (43.97%), Postives = 82/141 (58.16%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 E+DP+L L+KG GGA+LREK+V A++ FVV+A SK V L G + +PVEVV F RL + LG LR +G P++TD N I+D F I D + I + GVV HGLFL MA+ +IAG G+ Sbjct: 89 EIDPQLRLIKGLGGAMLREKIVAASAARFVVMAAVSKCVERL-GERSPLPVEVVAFGLPLCARRL----KALGGAPALRRDRSGAPFVTDEGNLILDCNFGI-IADPEALAASICAIPGVVAHGLFLGMASLAVIAGPDGI 223
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRMU (Ribose-5-phosphate isomerase A OS=Streptococcus mutans GN=rpiA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 64/143 (44.76%), Postives = 84/143 (58.74%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP N +KG GGALL EK+V +K ++ V DESK+V LG +L PVEVVQ + RL F + G + RE +G ++TD N+IIDL + I D ++ G + GVVEHGLF M VI+AGK GV + Sbjct: 86 EVDPNFNGIKGGGGALLMEKIVGTLTKDYIWVVDESKMVDTLGAFRL--PVEVVQ----YGAERLFREFEKKGYKPSFRE-YDGVRFVTDMKNFIIDLDLGS-IPDPIAFGNMLDHQVGVVEHGLFNGMVNRVIVAGKDGVRI 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PYRHO (Ribose-5-phosphate isomerase A OS=Pyrococcus horikoshii GN=rpiA PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 60/143 (41.96%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGEN-GKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 EVDP LNL+KGRG AL EK++E + +F+V+ DE KLV L K+ +P+EV+ WK + L +A+LR G N P ITDN N+IID F I D + E+ + GV+E+G+F D+A VI+ + GV+ Sbjct: 89 EVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYL-CQKMPVPIEVIPQAWKAIIEELS----IFNAKAELRMGVNKDGPVITDNGNFIIDAKFPR-IDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREGVK 225
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SPHAL (Ribose-5-phosphate isomerase A OS=Sphingopyxis alaskensis GN=rpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 E+D +KG GGALLREK+ E+AS +++AD SKLV+ LG K +PVEVV F +F RL LG +RE G P++TD NYI+D E P ++A I + GV+EHGLFLD ++IA VEV+ + Sbjct: 88 EIDDRFQAIKGGGGALLREKITESASTRVIIIADSSKLVAQLG--KFPLPVEVVPFATEFVRARLS----ALGARVTVREA-GGTPFLTDQGNYILDAALDEIPRPREIAAA--ITTIPGVLEHGLFLDEIDTIMIARGDMVEVRHR 225
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHISN (Ribose-5-phosphate isomerase A OS=Rhizobium sp. (strain NGR234) GN=rpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 64/143 (44.76%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 EVD +L L+KG GGALLREK+V +AS+ +V+ADESK+V LG KL P+EV QF + ++ + LG + LR +G P++TD + I+D F P + ++AG + + GVVEHGLFL MA+ IIAG G Sbjct: 87 EVDGKLRLIKGGGGALLREKIVASASERMIVIADESKVVDVLGAFKL--PIEVNQFGLTTTRLAIEKVAARLGLTGDIGLRASGDG-PFMTDGGHLILDASFGRIPDAEALAAG--LNAIPGVVEHGLFLGMASLAIIAGPEG 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_CHLAD (Ribose-5-phosphate isomerase A OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rpiA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.279e-20 Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 EVDP + L+KG GGALLREKMV AS+ ++ DESKL L G++ A+P+EVV F ++ L G +LR +G+P+ TD + I+D + PI D + G+VEHGLF+ +AT + +AG TGV Sbjct: 90 EVDPYMALIKGGGGALLREKMVAQASRRVAIIVDESKLSPAL-GTRFALPIEVVDFGYRATARWL----AAQGGSVRLRLRSDGQPFRTDQGHLILD-WACGPIADPTVLADRLAARAGIVEHGLFIGLATDLFVAGATGV 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_PARL1 (Ribose-5-phosphate isomerase A OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpiA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKL--REGENGKPYITDNFNYIIDLYF-ETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+D +L L+KG GGALLREK+V AS +V+AD SKLV LG +PVEV+ F ++ ++ GC K+ R E G+P+ TD+ N+I D F P DG+SA + ++ GVV++GLF+ +A I+ G ++ Sbjct: 87 ELDGKLRLIKGGGGALLREKIVATASDRMIVIADASKLVKTLG--SFPLPVEVIPFGSAVTARKIAEVASAHGCTGKMSRRADEYGEPFFTDSENFIYDCAFGSIPDPDGLSAA--LNRIPGVVDNGLFIGIAAMAIVGTDKGTDI 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_GLUOX (Ribose-5-phosphate isomerase A OS=Gluconobacter oxydans GN=rpiA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.282e-20 Identity = 69/170 (40.59%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 162 LLEGMHLLDKRSTRALPVALM-IHEVDP-ELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEA---KLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 L G+ L D + R + +A+ EV LNL+KG GGALLREK+V A+K FVV+ D +K V L G + +PVEV+ F W+ RL C A K R G ++TD N I+D +F PI+ +I ++ GVVEHG+FL+MA+ V++A GVE Sbjct: 66 LKAGIPLTDFSAHRRIDIAIDGADEVQRGSLNLIKGLGGALLREKIVAQAAKRFVVIVDGTKPVD-LLGERAPVPVEVISFGWECTAERL------AACGARGVKPRTDRAGSLFVTDTGNMILDCHF-GPIEKPEELAEKIDRIVGVVEHGMFLNMASEVLVATPDGVE 227 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |