CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_OLICO (Ribose-5-phosphate isomerase A OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rpiA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20 Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+ P L+++KG GGALLREK+V AAS VV++D+SK V LG + +PVEV+ F L F E G E LR+G +G ++TD ++I+D + I + + + GVVEHGLF+ +A I+AG G+ + Sbjct: 87 EIAPSLDVIKGGGGALLREKIVAAASTRMVVISDDSKWVETLG--RFPLPVEVIPFGLGATRRALATAFAEAGVTGEITLRQGPDGHAFVTDGGHWILDAHLGR-IPEPPRLAALLSAIPGVVEHGLFIGLAKTAILAGSQGIRI 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BRAJA (Ribose-5-phosphate isomerase A OS=Bradyrhizobium japonicum GN=rpiA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.304e-20 Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEA-----KLREGE-NGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+DPELNL+KG GGALLREK+V AAS +V+AD++K V LG + +P+EV+ F ++ F + G K + G+ +G ++TD ++I+D I D S + + GVVEHGLF+ +A++ ++AG G+ V Sbjct: 87 EIDPELNLIKGGGGALLREKIVAAASDRMIVIADDTKWVPTLG--RFPLPIEVIPFGLGATRRAIETAFAQCGVSGQMAVRKAKGGDKDGHVFVTDGGHWILDAQLGR-IVDPPSLAKALSAIPGVVEHGLFIGLASSAVLAGGEGIRV 232
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRSV (Ribose-5-phosphate isomerase A OS=Streptococcus sanguinis (strain SK36) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD N +KG GGALL EK+V +K ++ V DESK+V LG KL PVEVVQ + +L F G + RE ++ + ++TD N+IIDL I++ V E+ + GVVEHGLF M VI+AGK+G++V Sbjct: 86 EVDSAFNGIKGGGGALLMEKVVAVPTKHYIWVVDESKMVEKLGAFKL--PVEVVQ----YGAEQLFRRFERAGYKPAFREKDDQR-FVTDMQNFIIDLDLGV-IENSVEFAQELDHVVGVVEHGLFNQMVDKVIVAGKSGLQV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAW (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MW2) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W ++++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAS (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MSSA476) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W ++++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAR (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain MRSA252) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W ++++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKMVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAN (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain N315) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W ++++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAM (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W ++++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YHILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_KORCO (Ribose-5-phosphate isomerase A OS=Korarchaeum cryptofilum (strain OPF8) GN=rpiA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.627e-19 Identity = 59/143 (41.26%), Postives = 93/143 (65.03%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 E+D LNL+KG GGALLREK++ S ++V++AD +KLV L SK A+PVEV+ + + L +L + C+A++R ++ P+ITDN N I+D+ P++D S +E+ + GVVE G+F+ +A V+IA + V+V Sbjct: 84 EIDSNLNLLKGGGGALLREKVLAYNSSTYVIIADHTKLVEKL-CSKRALPVEVLPYGVSWT---LGNLIKRFNCDARIRI-KDLSPFITDNGNVIVDINC-PPLEDPASMESEVKGVPGVVEVGIFVGLADLVLIARGSEVKV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STAAC (Ribose-5-phosphate isomerase A OS=Staphylococcus aureus (strain COL) GN=rpiA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.125e-19 Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LN++KG GGAL REK+++ + FVVV DE+K+V L G +PVEV +F W + ++R + + ++ E ++ E +ITDN NYI+D I D + L GV E G FLDMA VI+ + GV++ K Sbjct: 89 EVDPSLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYL-GETFKLPVEVDKFNW-YQILRKIESYADIKVERRVNE---DVAFITDNGNYILDCKLPKGI-DPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK 228 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |