CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LISMC (Ribose-5-phosphate isomerase A OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rpiA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 52/140 (37.14%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E+D + +KG GGALLREKMV +AS + V E KLV LG K +P+EV+ F WK +++ + + LR +G+ Y+T+N NYI+D+ +T +D ++ ++ G+VEHGLFL ++ A G Sbjct: 85 EIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG--KFPLPIEVIPFGWK----QIERTLEKEHVQTILRRQSSGEIYVTNNGNYILDIVNQT-FRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANG 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LISMO (Ribose-5-phosphate isomerase A OS=Listeria monocytogenes GN=rpiA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTG 650 E+D + +KG GGALLREKMV +AS + V E KLV LG K +P+EV+ F WK +++ + + LR+ +G+ Y+T+N NYI+D+ +T D ++ ++ G+VEHGLFL +I A G Sbjct: 85 EIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLG--KFPLPLEVIPFGWK----QVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQT-FTDAEMWQEKLAQIPGIVEHGLFLHYVDIIICAKANG 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LACLS (Ribose-5-phosphate isomerase A OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rpiA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.235e-18 Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 E+D LN +KG G ALL EK+V SK ++ + DESKL LG K +PVEV+ ++ +L F R E G+ ITD ++IIDL+ I++ E+ + GVVEHGLF DM VI+AG GV++ S+ Sbjct: 86 EIDSHLNGIKGGGAALLMEKIVATYSKDYIWIVDESKLSENLGSFK--VPVEVI----RYGSEQLFKEFERAAYAPTWRLNEEGEKLITDMQHFIIDLHI-AKIENPQKLADELDLMVGVVEHGLFNDMVKKVIVAGSDGVKIISQ 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SILST (Ribose-5-phosphate isomerase A OS=Silicibacter sp. (strain TM1040) GN=rpiA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 57/148 (38.51%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRE---LGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIA-GKTGVEVK 662 E D ELNL+KG GGALL+EK+V AS VV+AD++K V LG +P+EV+ F W+ + +++ +G + LR PY+TD N+I+DL+ I + + ++ GVVE+GLF+D+ V+I G VEV+ Sbjct: 93 EFDSELNLIKGGGGALLQEKIVATASDQMVVIADKAKEVETLGA--FPLPIEVIPFGWQTSQALVEETLISMDVMGRSSTLRM-NGASPYVTDEGNHILDLHLNR-IGNPRQLALVLNQIPGVVENGLFIDICDTVVIGYGDGKVEVR 236
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_MARMM (Ribose-5-phosphate isomerase A OS=Maricaulis maris (strain MCS10) GN=rpiA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.929e-18 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAK----LREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVII 635 EVD L+KG G LLREK++ AS +V+ DESKLV+ LG K +PVEV +F + ++ + R G ++ R+G+ +P +TD NYI+D E I D + + + GVVEHGLF+++A VI+ Sbjct: 87 EVDGRFQLIKGGGACLLREKIIAHASDLMIVMVDESKLVATLG--KFPLPVEVDRFGFSLTASQVYEALRRAGIKSPDVQLRRKGDGLEPLVTDGGNYILDCACEA-IPDAGAVDRALKAIPGVVEHGLFINLARVVIV 222
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SILPO (Ribose-5-phosphate isomerase A OS=Silicibacter pomeroyi GN=rpiA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRE---LGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIA-GKTGVEVK 662 E D +LNL+KG GGALL+EK+V AS VV+AD K VS LG +PVEV+ F W+ L++ LG A LR P++TD N+I+DL+ + I + + ++ GVVE+GLF+D+ V++ G VE++ Sbjct: 93 EFDGDLNLIKGGGGALLQEKIVATASDQMVVIADLGKEVSRLGA--FPLPVEVIPFGWQTTQALLEETLISMDVLGRTATLRM-NGDTPFVTDEGNHILDLHLQR-IGNARQLALVLNQIPGVVENGLFIDICDTVVVGHGDGRVEIR 236
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_LACLA (Ribose-5-phosphate isomerase A OS=Lactococcus lactis subsp. lactis GN=rpiA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 E+D LN +KG G ALL EK+V SK ++ + DESKL LG K+ PVEV+ + ++ F G R E + ITD ++IIDL+ + IK+ E+ + GVVEHGLF +M VI+AG GV + +K Sbjct: 86 EIDSSLNGIKGGGAALLMEKIVATYSKDYIWIVDESKLSENLGSFKI--PVEVI----PYGSQQVFKKFEAAGYAPTWRLNEENERLITDMHHFIIDLHI-SQIKEPEKLAEELDLMGGVVEHGLFNNMVKKVIVAGNEGVRIINK 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRPZ (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=rpiA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 63/143 (44.06%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD + N +KG G ALL EK+V +K ++ V D SK+V LG KL PVEVVQ + RL +F + G + R + + +TD NYIIDL IKD V+ G + GVVEHGLF M VI+A K GV V Sbjct: 86 EVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLGAFKL--PVEVVQ----YGADRLFRVFEKAGYKPSFRMKGDSR-LVTDMQNYIIDLDLGC-IKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGVTV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRPM (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M28 GN=rpiA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 63/143 (44.06%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD + N +KG G ALL EK+V +K ++ V D SK+V LG KL PVEVVQ + RL +F + G + R + + +TD NYIIDL IKD V+ G + GVVEHGLF M VI+A K GV V Sbjct: 86 EVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLGAFKL--PVEVVQ----YGADRLFRVFEKAGYKPSFRMKGDSR-LVTDMQNYIIDLDLGC-IKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGVTV 220
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRPG (Ribose-5-phosphate isomerase A OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=rpiA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.523e-17 Identity = 63/143 (44.06%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVD + N +KG G ALL EK+V +K ++ V D SK+V LG KL PVEVVQ + RL +F + G + R + + +TD NYIIDL IKD V+ G + GVVEHGLF M VI+A K GV V Sbjct: 86 EVDKDFNGIKGGGAALLMEKIVATPTKEYIWVVDASKMVEHLGAFKL--PVEVVQ----YGADRLFRVFEKAGYKPSFRMKGDSR-LVTDMQNYIIDLDLGC-IKDPVAFGHLLDGTVGVVEHGLFNGMVDKVIVASKDGVTV 220 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |