CX288008

Overview
NameCX288008
Unique NameCX288008
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.516e-47
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.998e-47
Identity = 91/115 (79.13%), Postives = 102/115 (88.70%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_COCIM (Autophagy-related protein 8 OS=Coccidioides immitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.998e-47
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVPADLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KD+DGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDDDGFLYITYSGENTFG 116
[Close]
BLAST of CX288008 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.998e-47
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 2 
Query:   17 KSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 361
            +S FK EHP E+R+AE+ RIR+KY DRIPVI EK E+SDI  IDKKKYLVP+DLTVGQFVYV+RKRIKLS EKAIFIFV  +LPPTAA+MS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of CX288008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_COLLN2.692e-4779.13Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_ASPTN2.692e-4779.13Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR2.692e-4779.13Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC2.692e-4779.13Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU2.692e-4779.13Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL2.692e-4779.13Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8_PHANO3.516e-4779.13Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_EMENI5.998e-4779.13Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_COCIM5.998e-4778.26Autophagy-related protein 8 OS=Coccidioides immiti... [more]
ATG8_CHAGB5.998e-4778.26Autophagy-related protein 8 OS=Chaetomium globosum... [more]

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Properties
Property NameValue
Genbank descriptionC01015G09SK Veg1 Citrus clementina cDNA clone C01015G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288008 ID=CX288008; Name=CX288008; organism=Citrus clementina; type=EST; length=631bp
AGGAGAAGCTATGGCCAAGAGCTCCTTCAAGCTTGAACACCCACTCGAAA
GGAGGCAGGCTGAATCTGCCCGTATCAGGGAGAAGTATCCTGATAGAATA
CCAGTGATTGTGGAGAAGGCTGAAAGGAGTGACATACCTGATATTGACAA
AAAAAAATACCTGGTTCCTGCTGATCTGACTGTTGGACAATTTGTTTATG
TGGTCCGGAAGAGGATAAAGCTCAGTGCTGAGAAGGCCATATTCATATTT
GTCAAGAACATTTTGCCACCCACTGCTGCAATGATGTCTGCAATTTATGA
GGAAAACAAAGATGAGGATGGCTTCCTTTACATGACTTACAGTGGGGAGA
ACACATTCGGGGCATCTTTCTAAGGGAATCAACTGAACTTCTGTAGATTA
ACTCTGAAAAGACTTGATGGAAATATGTAAATCCTTTGCTATTTGCTTTC
AACTGAGGGAGCACTTGGAAAGCATGATCTTCCTGGACGCAGCCCCTTCT
TAAAGTTTGGATCTATTGTTACTCCTCTTTATCTTATTTGTTGCAGTAAA
TATTCGTGATTTCATATTGGATGAGCAAGTTAATACAGGTACTGTTGGAT
TAACTAANAAAAAAAAAAAAAAAAAAAAAAA
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