CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4CB_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit B OS=Danio rerio GN=ppp4cb PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 9.417e-101
Identity = 172/197 (87.31%), Postives = 188/197 (95.43%), Query Frame = 3
Query:  141 EMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +MSDLDRQI+QL++CE +KE+EVKALC KA EILVEESNVQRVD+PVT+CGDIHGQFYD+KELF+VGGD P+TNYLF+GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSV VWRYCT+IFDYLSLSA+I+ KIF VHGGLSP+I TLDQIRTIDRKQEVPHDG MCDLLWSD
Sbjct:    3 DMSDLDRQIDQLRRCELIKENEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYDLKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_DICDI (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Dictyostelium discoideum GN=ppp4c PE=1 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 3.956e-99
Identity = 168/195 (86.15%), Postives = 186/195 (95.38%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            SDLDRQIEQLK+CE +KESEV+ALC KA EIL+EE NVQRVD+PVTICGDIHGQFYD+KELFKVGGDCP+TNYLF+GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFY+EC+RKYGSV VW+YCT+IFDYLSLSAL++ KIF VHGGLSP+I+TLDQIR IDRKQEVPH+G MCDL+WSD
Sbjct:    3 SDLDRQIEQLKRCEIIKESEVRALCSKAREILLEEGNVQRVDSPVTICGDIHGQFYDLKELFKVGGDCPQTNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYEECVRKYGSVTVWKYCTEIFDYLSLSALVDGKIFCVHGGLSPSINTLDQIRAIDRKQEVPHEGPMCDLMWSD 197          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPX4_PARTE (Serine/threonine-protein phosphatase PP-X homolog 4 OS=Paramecium tetraurelia GN=Ppx4 PE=3 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.374e-98
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            SDLDRQI QL+ CE + E EVKALC KA EILVEESNVQRVDAPVTICGDIHGQF+D+ ELFKVGGDCP TNYLFLGDFVDRGF SVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS+NVWRYCTDIFDYLSL+A+IE KIF VHGGLSP+I T+D IR IDRKQEVPHDGAMCDL+WSD
Sbjct:    4 SDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQEVPHDGAMCDLMWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPX3_PARTE (Serine/threonine-protein phosphatase PP-X homolog 3 OS=Paramecium tetraurelia GN=Ppx3 PE=3 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 4.374e-98
Identity = 170/195 (87.18%), Postives = 180/195 (92.31%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            SDLDRQI QL+ CE + E EVKALC KA EILVEESNVQRVDAPVTICGDIHGQF+D+ ELFKVGGDCP TNYLFLGDFVDRGF SVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS+NVWRYCTDIFDYLSL+A+IE KIF VHGGLSP+I T+D IR IDRKQEVPHDGAMCDL+WSD
Sbjct:    4 SDLDRQIAQLRNCENITEGEVKALCTKAREILVEESNVQRVDAPVTICGDIHGQFFDLMELFKVGGDCPDTNYLFLGDFVDRGFNSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSLNVWRYCTDIFDYLSLAAVIEEKIFCVHGGLSPSIKTMDDIRAIDRKQEVPHDGAMCDLMWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 1.273e-97
Identity = 168/197 (85.28%), Postives = 183/197 (92.89%), Query Frame = 3
Query:  141 EMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            + SDLDRQIEQLK+CE +KE+EVKALC KA EILVEE NVQRVD+PVT+CGDIHGQFYD+KELFKVGGD P+ NYLF+GDFVDRG+YSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGS  VWRYCT+IFDYLSLSA+I+ KIF VHGGLSP+I  LDQIR+IDRKQEVPHDG MCDLLWSD
Sbjct:    3 DYSDLDRQIEQLKRCEIIKENEVKALCAKAREILVEEGNVQRVDSPVTVCGDIHGQFYDLKELFKVGGDVPEKNYLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQYLDQIRSIDRKQEVPHDGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4CA_DANRE (Serine/threonine-protein phosphatase 4 catalytic subunit A OS=Danio rerio GN=ppp4ca PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 2.835e-97
Identity = 166/200 (83.00%), Postives = 185/200 (92.50%), Query Frame = 3
Query:  132 IKKEMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            I  + +DLDRQIEQL++CE +KE+EVKALC KA EILVEESNVQ VD+PVT+CGDIHGQFYD+KELF+VGG+ P+TNYLF+GDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGF+DEC RKYGS  VWRYCT+IFDYLSLSA+++ KIF VHGGLSP+I TLDQIRTIDRKQEVPHDG MCDLLWSD
Sbjct:    4 IMGDFTDLDRQIEQLRRCELIKENEVKALCAKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRKYGSATVWRYCTEIFDYLSLSAIVDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSD 203          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 9.768e-90
Identity = 152/194 (78.35%), Postives = 172/194 (88.66%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDR IE+L +CE + E +VK LC KA EIL EE NVQ +D+PVTICGDIHGQFYD+ ELFKVGG  P TNYLFLGDFVDRGFYSVETFLLLLALK RYPDR+ LIRGNHESRQITQVYGFYDECLRKYG+ +VW++CT++FDYLSL+A+I+ K+F VHGGLSP+IST+DQIR IDRKQEVPHDG MCDLLWSD
Sbjct:   31 DLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFKVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECLRKYGNASVWKHCTEVFDYLSLAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCDLLWSD 224          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 8.269e-89
Identity = 149/194 (76.80%), Postives = 172/194 (88.66%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDR IE+L +CE + E +VK LC KA EIL EE NVQ +D+PVTICGDIHGQFYD+ ELF+VGG  P TNYLFLGDFVDRGFYSVETFLLLLALK RYPDR+ LIRGNHESRQITQVYGFYDEC+RKYG+ +VW++CT++FDYL+L+A+I+ K+F VHGGLSP+IST+DQIR IDRKQEVPHDG MCDLLWSD
Sbjct:   31 DLDRHIEKLMRCELIAEQDVKTLCAKAREILAEEGNVQVIDSPVTICGDIHGQFYDLMELFRVGGPVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRKYGNASVWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCDLLWSD 224          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 6.552e-86
Identity = 148/196 (75.51%), Postives = 173/196 (88.27%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            MSD+D+ IE LK  E LKE++VK LC KA +IL  E NV RV+APVTICGDIHGQFYD+ ELFKVGGD P+TNYLFLGDFVDRG+ SVETFLLLLALKVRYPD+ITLIRGNHESRQITQVYGFYDECLRKY ++NVW+YCT++FDYL+L+A++ + IF VHGGLSP I T+D+IR I+RKQEVPH+G MCDL+WSD
Sbjct:    1 MSDIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFYDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDNIFCVHGGLSPYIKTIDEIRIINRKQEVPHEGVMCDLMWSD 196          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.546e-85
Identity = 147/196 (75.00%), Postives = 172/196 (87.76%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            MSD+D+ IE LK  E LKE++VK LC KA +IL  E NV RV+APVTICGDIHGQF D+ ELFKVGGD P+TNYLFLGDFVDRG+ SVETFLLLLALKVRYPD+ITLIRGNHESRQITQVYGFYDECLRKY ++NVW+YCT++FDYL+L+A++ + IF VHGGLSP I T+D+IR I+RKQEVPH+G MCDL+WSD
Sbjct:    1 MSDIDQWIETLKNGENLKETDVKILCNKAKDILNNEDNVIRVEAPVTICGDIHGQFQDLMELFKVGGDVPETNYLFLGDFVDRGYNSVETFLLLLALKVRYPDQITLIRGNHESRQITQVYGFYDECLRKYSTLNVWKYCTEVFDYLALAAVVNDSIFCVHGGLSPYIKTIDEIRIINRKQEVPHEGVMCDLMWSD 196          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4CB_DANRE9.417e-10187.31Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DICDI3.956e-9986.15Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX4_PARTE4.374e-9887.18Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX3_PARTE4.374e-9887.18Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP4C_DROME1.273e-9785.28Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4CA_DANRE2.835e-9783.00Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEEL9.768e-9078.35Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEBR8.269e-8976.80Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPX1_PARTE6.552e-8675.51Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX2_PARTE5.546e-8575.00Serine/threonine-protein phosphatase PP-X homolog ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
back to top