CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C2_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 2 OS=Caenorhabditis elegans GN=pph-4.2 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.132e-84
Identity = 142/195 (72.82%), Postives = 171/195 (87.69%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +DLDRQIE   +CE + E++VK++C K  EIL+EE+NVQ +D PVTICGDIHGQF+D+ ELF+VGG  P TNYLFLGD+VDRG+ SVETF+LL+ LK RYPDRITLIRGNHESRQITQVYGFYDEC+RKYGS  VW++CT+IFDYLSL+A+I+ K+F VHGGLSP+I+TLDQIR +DRK EVPH+G MCDLLWSD
Sbjct:   15 NDLDRQIEIAMRCELICETQVKSICAKVREILIEEANVQVIDTPVTICGDIHGQFHDLMELFRVGGSPPNTNYLFLGDYVDRGYNSVETFILLMLLKCRYPDRITLIRGNHESRQITQVYGFYDECVRKYGSGQVWKHCTEIFDYLSLAAVIDGKLFCVHGGLSPSIATLDQIRVLDRKIEVPHEGPMCDLLWSD 209          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AA_DICDI (Serine/threonine-protein phosphatase 2A catalytic subunit A OS=Dictyostelium discoideum GN=pho2A PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.132e-84
Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 3
Query:  141 EMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            E  D+D+ I  LK+C+PL ESEV+ LC KA EIL +ESNVQ V  PVT+CGDIHGQF+D+ ELFK+GG+CP TNYLF+GD+VDRGFYSVET  LL+ALKVRY DR+T++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDYL L+ALIEN++F +HGGLSP+I TLD I  +DR QEVPH+GAMCDLLWSD
Sbjct:    3 EFQDVDKYISILKECKPLSESEVRDLCEKAREILSKESNVQPVRCPVTVCGDIHGQFHDLMELFKIGGNCPDTNYLFMGDYVDRGFYSVETVTLLVALKVRYKDRVTILRGNHESRQITQVYGFYDECLRKYGNPNVWKLFTDLFDYLPLTALIENQVFCLHGGLSPSIDTLDHIENLDRVQEVPHEGAMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 310.071 bits (793), Expect = 8.009e-84
Identity = 141/194 (72.68%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD QI QL +C+PL E +V+ALC KA EIL++ESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ LKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH G MCDLLWSD
Sbjct:    9 DLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHGGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 1.046e-83
Identity = 141/193 (73.06%), Postives = 167/193 (86.53%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD QIEQL +C PL E+EVK LC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYGS NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I  LD +R++DR QEVPH+G MCDLLWSD
Sbjct:   16 LDAQIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSD 208          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.784e-83
Identity = 141/194 (72.68%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD QI QL +C+PL E EV+ LC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+GAMCDLLWSD
Sbjct:   12 NLDEQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGAMCDLLWSD 205          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 308.916 bits (790), Expect = 1.784e-83
Identity = 141/193 (73.06%), Postives = 166/193 (86.01%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD QIEQL +C PL E EVK LC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYGS NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I  LD +R++DR QEVPH+G MCDLLWSD
Sbjct:   15 LDAQIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSD 207          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.330e-83
Identity = 139/194 (71.65%), Postives = 168/194 (86.60%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD QI QL +C+PL E +V+ALC KA EIL EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP R+T++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD +R+ DR QEVPH+GAMCDLLWSD
Sbjct:   14 NLDEQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNVRSFDRVQEVPHEGAMCDLLWSD 207          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.191e-83
Identity = 139/194 (71.65%), Postives = 166/194 (85.57%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD QI QL +C+PL E +V+ALC KA EIL++ESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ LKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+G MCDLLWSD
Sbjct:   13 DLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.191e-83
Identity = 141/193 (73.06%), Postives = 167/193 (86.53%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD QIE+L +C+PL E EV+ALC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+G MCDLLWSD
Sbjct:    8 LDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 200          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 5.191e-83
Identity = 141/193 (73.06%), Postives = 167/193 (86.53%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD QIE+L +C+PL E EV+ALC KA EIL+EESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+G MCDLLWSD
Sbjct:    8 LDDQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 200          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C2_CAEEL6.132e-8472.82Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2AA_DICDI6.132e-8472.08Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A_BRANA8.009e-8472.68Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ORYSI1.046e-8373.06Putative serine/threonine-protein phosphatase PP2A... [more]
PP2A_TOBAC1.784e-8372.68Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ORYSJ1.784e-8373.06Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A5_TOBAC2.330e-8371.65Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A3_ARATH5.191e-8371.65Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A2_ORYSJ5.191e-8373.06Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI5.191e-8373.06Serine/threonine-protein phosphatase PP2A-2 cataly... [more]

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Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
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