CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_ARATH (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Arabidopsis thaliana GN=PP2A2 PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.191e-83
Identity = 139/194 (71.65%), Postives = 170/194 (87.63%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDRQIEQL +C+PL E++V+ LC +A  ILVEE NVQ V  PVT+CGDIHGQFYD+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DR+T++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALIE+++F +HGGLSP++ TLD IR++DR QEVPH+G MCDLLWSD
Sbjct:    6 DLDRQIEQLMECKPLSEADVRTLCDQARAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRSLDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A1_ARATH (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 5.191e-83
Identity = 140/194 (72.16%), Postives = 170/194 (87.63%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDRQIEQL +C+PL E++VK LC +A  ILVEE NVQ V  PVT+CGDIHGQFYD+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DR+T++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALIE+++F +HGGLSP++ TLD IR++DR QEVPH+G MCDLLWSD
Sbjct:    6 DLDRQIEQLMECKPLGEADVKILCDQAKAILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRSLDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 6.780e-83
Identity = 139/194 (71.65%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD QI QL +C+PL E +V+ALC KA EIL++ESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALK+RYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FDY  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+G MCDLLWSD
Sbjct:   13 DLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSJ (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.780e-83
Identity = 140/195 (71.79%), Postives = 170/195 (87.18%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +DLDRQI QL++C+ L E+EV+ALC +A  IL+EE NVQ V  PVT+CGDIHGQFYD+ ELF++GGD P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL+EN++F +HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    5 ADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A1_ORYSI (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.780e-83
Identity = 140/195 (71.79%), Postives = 170/195 (87.18%), Query Frame = 3
Query:  147 SDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +DLDRQI QL++C+ L E+EV+ALC +A  IL+EE NVQ V  PVT+CGDIHGQFYD+ ELF++GGD P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL+EN++F +HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    5 ADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: YOU5_SCHPO (Putative serine/threonine-protein phosphatase C26H8.05c OS=Schizosaccharomyces pombe GN=SPBC26H8.05c PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.510e-82
Identity = 139/194 (71.65%), Postives = 165/194 (85.05%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD Q+E+L+    + ES V  LC +  +IL+EESN+Q + +PVTICGDIHGQ +D+ ELF++GG CP T YLFLGDFVDRGFYSVETFLLLL LK +YP  +TLIRGNHESRQITQVYGFYDEC+RKYGS NVWRYC +IFDYLSL AL++ K+F VHGGLSP+IS++DQIR +DRKQEVPH+GAMCDLLWSD
Sbjct:    5 DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.510e-82
Identity = 139/194 (71.65%), Postives = 166/194 (85.57%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DL+ QI QL +C+PL E +VK LC KA EIL++ESNVQ V +PVTICGDIHGQF+D+ ELF++GG CP TNYLF+GD+VDRG+YSVET  LL+ALKVRYP RIT++RGNHESRQITQVYGFYDECLRKYGS NVW+  TD+FD+  L+AL+E++IF +HGGLSP+I TLD IR  DR QEVPH+G MCDLLWSD
Sbjct:   13 DLNEQISQLMQCKPLSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSD 206          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSJ (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.510e-82
Identity = 140/194 (72.16%), Postives = 168/194 (86.60%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDRQI QL++C+ L E EV+ALC +A  IL+EE NVQ V  PVT+CGDIHGQFYD+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALIEN++F +HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    7 DLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 200          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A3_ORYSI (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A3 PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.510e-82
Identity = 140/194 (72.16%), Postives = 168/194 (86.60%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDRQI QL++C+ L E EV+ALC +A  IL+EE NVQ V  PVT+CGDIHGQFYD+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALIEN++F +HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    7 DLDRQIAQLRECKHLAEGEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIENQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 200          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_SCHPO (Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Schizosaccharomyces pombe GN=ppa2 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.395e-82
Identity = 136/196 (69.39%), Postives = 171/196 (87.24%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            + D+DR IEQLKKCEPL E++V+ LC KA E+L +E+NVQ V  PVT+CGDIHGQF+D+ ELFK+GGD P  NYLF+GD+VDRG++SVET  LL+A+K+RYP+RIT++RGNHESRQITQVYGFYDECLRKYGS NVW++ T++FDY  L+ALIE++IF +HGGLSP+I +LD +RT+DR QEVPH+G MCDLLWSD
Sbjct:   20 LGDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSD 215          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A2_ARATH5.191e-8371.65Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A1_ARATH5.191e-8372.16Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A4_ARATH6.780e-8371.65Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A1_ORYSJ6.780e-8371.79Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2A1_ORYSI6.780e-8371.79Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
YOU5_SCHPO1.510e-8271.65Putative serine/threonine-protein phosphatase C26H... [more]
PP2A_MEDSA1.510e-8271.65Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A3_ORYSJ1.510e-8272.16Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A3_ORYSI1.510e-8272.16Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A2_SCHPO4.395e-8269.39Major serine/threonine-protein phosphatase PP2A-2 ... [more]

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Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
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