CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.740e-82
Identity = 137/199 (68.84%), Postives = 168/199 (84.42%), Query Frame = 3
Query:  135 KKEMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            K    +LD+ IEQL +C  L ES+V++LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    4 KSFAKELDQWIEQLNECRQLSESQVRSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A1_NEUCR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Neurospora crassa GN=pph-1 PE=3 SV=3)

HSP 1 Score: 303.908 bits (777), Expect = 5.740e-82
Identity = 138/193 (71.50%), Postives = 165/193 (85.49%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD  IE L  C+ L ES+V+ LC KA E+L +ESNVQ V  PVT+CGDIHGQF+D+ ELFK+GG CP TNYLF+GD+VDRG+YSVET  LL+ALK+RYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALI+N+IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:   28 LDGWIESLMNCKQLAESDVQRLCEKAREVLQDESNVQPVKCPVTVCGDIHGQFHDLMELFKIGGSCPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPNRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIDNQIFCLHGGLSPSIDTLDNIRALDRIQEVPHEGPMCDLLWSD 220          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.496e-82
Identity = 135/194 (69.59%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ +EQL +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 DLDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A5_ARATH (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Arabidopsis thaliana GN=PP2A5 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.670e-81
Identity = 138/194 (71.13%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            D+DRQIEQL +C+ L E+EVK LC  A  ILVEE NVQ V  PVT+CGDIHGQFYD+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DR+T++RGNHESRQITQVYGFYDECLRKYG+ NVW++ TD+FDYL L+ALIE+++F +HGGLSP++ TLD IR++DR QEVPH+G MCDLLWSD
Sbjct:    7 DIDRQIEQLMECKALSETEVKMLCEHAKTILVEEYNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSSPDTNYLFMGDYVDRGYYSVETVSLLVALKVRYRDRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKHFTDLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRSLDRIQEVPHEGPMCDLLWSD 200          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A_HEVBR (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Hevea brasiliensis GN=PP2A PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 139/194 (71.65%), Postives = 166/194 (85.57%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLDRQIE L +C+PL E+  + LC +A  ILVEE NVQ V  PVT+CGDIHGQFYD+ ELF++GG+ P TNYLF+GD+VDRG+YSVET  LL+ALKVRY DRIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+ALIE++IF +HGGLSP++ TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    6 DLDRQIEHLMECKPLPEARGQTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 134/194 (69.07%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD+ +EQL +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 134/194 (69.07%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD+ +EQL +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 134/194 (69.07%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD+ +EQL +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.181e-81
Identity = 134/194 (69.07%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD+ +EQL +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 ELDQWVEQLNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.849e-81
Identity = 136/194 (70.10%), Postives = 167/194 (86.08%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD+ IEQL +C+ L ES+VK+LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRY +RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    9 ELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 202          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2AA_CHICK5.740e-8268.84Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A1_NEUCR5.740e-8271.50Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AB_BOVIN7.496e-8269.59Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A5_ARATH1.670e-8171.13Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A_HEVBR2.181e-8171.65Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2AB_RAT2.181e-8169.07Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT2.181e-8169.07Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE2.181e-8169.07Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN2.181e-8169.07Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RAT2.849e-8170.10Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
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