CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_YEAST (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH22 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.940e-79
Identity = 130/196 (66.33%), Postives = 163/196 (83.16%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            ++ LD+ IE L KCEPL E +V  LC  A+++L  E NV+ ++ PVTICGD+HGQF+D+ ELFK+GG CP TNYLF+GD+VDRG+YSVET   L+A+KVRYP RIT++RGNHESRQITQVYGFYDECLRKYGS NVW+  TD+FDY  ++AL++NKIF +HGGLSP I T+DQ+R ++R QEVPH+G MCDLLWSD
Sbjct:   75 INQLDQWIEHLSKCEPLSEDDVARLCKMAVDVLQFEENVKPINVPVTICGDVHGQFHDLLELFKIGGPCPDTNYLFMGDYVDRGYYSVETVSYLVAMKVRYPHRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPVTALVDNKIFCLHGGLSPMIETIDQVRDLNRIQEVPHEGPMCDLLWSD 270          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A_ACECL (Serine/threonine-protein phosphatase PP2A-1 catalytic subunit OS=Acetabularia cliftonii PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.323e-78
Identity = 134/193 (69.43%), Postives = 159/193 (82.38%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD  IE L +C+PL E  VK L  KA E+   E NVQ V  PVT+CGDIHGQF+DM ELFK+GG CP TNYLF+GD+VDRG+ SVET  LL++LKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+  TD+FD+L L+ LIEN++F +HGGLSPA+ TLDQIR +DR QEVPH+G MCDLLWSD
Sbjct:    7 LDEWIEHLMQCKPLPEENVKELVAKAREVFSNEKNVQPVKMPVTVCGDIHGQFHDMVELFKIGGTCPDTNYLFMGDYVDRGYNSVETVTLLVSLKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWQLFTDLFDFLPLTGLIENEVFCLHGGLSPALDTLDQIRELDRIQEVPHEGPMCDLLWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 1.323e-78
Identity = 130/186 (69.89%), Postives = 160/186 (86.02%), Query Frame = 3
Query:  174 LKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L +C+ L E++V+ LC KA EIL +ESNVQ V  PVT+CGD+HGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALKVRYP+RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y TD+FDYL L+AL++ +IF +HGGLSP+I TLD IR +DR QEVPH+G MCDLLWSD
Sbjct:    1 LNECKQLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSD 186          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A2_ERYGR (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Erysiphe graminis subsp. hordei GN=PP2A-2 PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 5.028e-78
Identity = 134/196 (68.37%), Postives = 163/196 (83.16%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +S LD  IE L  C+ L E +V  LC KA E+L  ESNVQ V  PVT+CGDIHGQF+D+ ELF++GG  P TNYLF+GD+VDRG+YSVET  LL+ALK+RYP RIT++RGNHESRQITQVYGFYDECLRKYG+ NVW+Y T++FD+L L+ALIEN+IF +HGGLSP+I TLD I+++DR QEVPH+G MCDLLWSD
Sbjct:   26 ISTLDGWIENLMACKQLPEVDVLRLCEKAREVLHSESNVQPVKCPVTVCGDIHGQFHDLMELFRIGGPNPDTNYLFMGDYVDRGYYSVETVTLLVALKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTNLFDFLPLTALIENQIFCLHGGLSPSIDTLDNIKSLDRIQEVPHEGPMCDLLWSD 221          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPP6_DICDI (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Dictyostelium discoideum GN=ppp6c PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.495e-77
Identity = 127/193 (65.80%), Postives = 160/193 (82.90%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD  +E  ++C+ L E+++K LC +  E+L+EESNVQ V +PVTICGDIHGQFYD+ ELFK GG+ P TNY+F+GDFVDRG+YS+ETF  LLALK RYPD+ITL+RGNHESRQITQVYGFYDEC +KYG+VN W+YCT +FD+L+L+A+I+ K+  VHGGLSP + TLDQIR I R  E+PH+G  CDL+WSD
Sbjct:    7 LDEWVETARQCKYLPENDLKKLCERVKELLLEESNVQPVRSPVTICGDIHGQFYDLLELFKTGGEVPDTNYVFMGDFVDRGYYSLETFTYLLALKARYPDKITLLRGNHESRQITQVYGFYDECQQKYGNVNAWKYCTSVFDFLTLAAIIDGKVLCVHGGLSPKVRTLDQIRIISRNLEIPHEGPFCDLMWSD 199          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPP6_RAT (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus GN=Ppp6c PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.238e-76
Identity = 128/194 (65.98%), Postives = 159/194 (81.96%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ +E  ++C+ L E+++K LC    ++L+EESNVQ V  PVT+CGDIHGQFYD+ ELF+ GG  P TNY+F+GDFVDRG+YS+ETF  LLALK ++PDRITL+RGNHESRQITQVYGFYDEC  KYG+ N WRYCT +FD L+++ALI+ +I  VHGGLSP I TLDQIRTI+R QE+PH GA CDL+WSD
Sbjct:    5 DLDKYVEIARQCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPP6_MOUSE (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Mus musculus GN=Ppp6c PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.238e-76
Identity = 128/194 (65.98%), Postives = 159/194 (81.96%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ +E  ++C+ L E+++K LC    ++L+EESNVQ V  PVT+CGDIHGQFYD+ ELF+ GG  P TNY+F+GDFVDRG+YS+ETF  LLALK ++PDRITL+RGNHESRQITQVYGFYDEC  KYG+ N WRYCT +FD L+++ALI+ +I  VHGGLSP I TLDQIRTI+R QE+PH GA CDL+WSD
Sbjct:    5 DLDKYVEIARQCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPE1_SCHPO (Serine/threonine-protein phosphatase ppe1 OS=Schizosaccharomyces pombe GN=ppe1 PE=1 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.113e-76
Identity = 126/196 (64.29%), Postives = 159/196 (81.12%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            M DLD  I  ++KC+ L E ++K LC     IL+EESN+Q V  PVT+CGDIHGQFYD+ ELF+VGG+ P TNY+F+GDFVDRG++S+ETF L + LK RYPD+ITL+RGNHESRQITQVYGFYDEC  KYG+ NVW+YC  +FD+L+L+A+I+NKI  VHGGLSP + TLDQIR + R QE+PH+G+ CDL+WSD
Sbjct:    1 MFDLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSD 196          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPP6_HUMAN (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Homo sapiens GN=PPP6C PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.759e-76
Identity = 128/194 (65.98%), Postives = 158/194 (81.44%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ +E  + C+ L E+++K LC    ++L+EESNVQ V  PVT+CGDIHGQFYD+ ELF+ GG  P TNY+F+GDFVDRG+YS+ETF  LLALK ++PDRITL+RGNHESRQITQVYGFYDEC  KYG+ N WRYCT +FD L+++ALI+ +I  VHGGLSP I TLDQIRTI+R QE+PH GA CDL+WSD
Sbjct:    5 DLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_YEAST (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH3 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 6.147e-76
Identity = 132/196 (67.35%), Postives = 159/196 (81.12%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            M DLD+ I  L+  + + E  V  LCL + E+L+ E NV +VD PVTICGDIHGQ +D+  LF+  G   KT Y+FLGDFVDRGFYS+E+FLLLL  K+RYPDRITLIRGNHE+RQIT+VYGFYDE +RKYG+ NVWRYC ++FDYLSL A+I N IF VHGGLSP ++T+D+IRTIDRKQEVPH+GAMCDLLWSD
Sbjct:    1 MMDLDKIIASLRDGKHIPEETVFRLCLNSQELLMNEGNVTQVDTPVTICGDIHGQLHDLLTLFEKSGGVEKTRYIFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVYGFYDEVVRKYGNSNVWRYCCEVFDYLSLGAIINNSIFCVHGGLSPDMTTVDEIRTIDRKQEVPHEGAMCDLLWSD 196          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP2A2_YEAST5.940e-7966.33Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_ACECL1.323e-7869.43Serine/threonine-protein phosphatase PP2A-1 cataly... [more]
PP2AB_PIG1.323e-7869.89Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2A2_ERYGR5.028e-7868.37Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PPP6_DICDI2.495e-7765.80Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_RAT1.238e-7665.98Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPP6_MOUSE1.238e-7665.98Serine/threonine-protein phosphatase 6 catalytic s... [more]
PPE1_SCHPO2.113e-7664.29Serine/threonine-protein phosphatase ppe1 OS=Schiz... [more]
PPP6_HUMAN2.759e-7665.98Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP4C_YEAST6.147e-7667.35Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
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