CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_CANGA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Candida glabrata GN=PPH3 PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.984e-75
Identity = 131/194 (67.53%), Postives = 157/194 (80.93%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD  +  LK+   + E  V ALC+ + E+L+ ESNV RVD PVTICGDIHGQ +D+  LF+  G   KT Y+FLGDFVDRGFYS+E+FLLLL  K+RYPDRITLIRGNHE+RQIT+VYGFYDE +RKYG+ NVWRYC ++FDYLSL A+I + IF VHGGLSP I+TL++IR IDRKQEVPH+G MCDLLWSD
Sbjct:    4 DLDEILVSLKEGRHIPEETVYALCMDSQELLMNESNVARVDTPVTICGDIHGQLHDLLTLFEKSGGVEKTRYVFLGDFVDRGFYSLESFLLLLVYKLRYPDRITLIRGNHETRQITKVYGFYDEVMRKYGNSNVWRYCCEVFDYLSLGAIINDSIFCVHGGLSPDITTLNEIRAIDRKQEVPHEGGMCDLLWSD 197          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PPP6_DROME (Serine/threonine-protein phosphatase 6 catalytic subunit OS=Drosophila melanogaster GN=PpV PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.813e-74
Identity = 121/196 (61.73%), Postives = 157/196 (80.10%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            M D+D+ IE +KKC+ L E+E+K LC    +IL+EE+N+  V  PVT+CGDIHGQFYD+++LF+ GG  P TNY+F+GDFVDRG+YS+ETF  LL LK RYP RITL+RGNHE+RQIT+VYGF+DEC  KYG+ N W+YC  +FD L+++A+I+ ++  VHGGLSP I TLDQIRTIDR  E+P+ GA CDL+WSD
Sbjct:    1 MGDVDKWIEDVKKCKYLPENELKKLCEMVCDILLEETNILPVSTPVTVCGDIHGQFYDLEQLFRTGGQVPHTNYIFMGDFVDRGYYSLETFTRLLTLKARYPSRITLLRGNHETRQITKVYGFFDECFSKYGNANGWKYCCKVFDLLTIAAIIDEEVLCVHGGLSPEIITLDQIRTIDRNGEIPYKGAFCDLVWSD 196          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_ASHGO (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Ashbya gossypii GN=PPH3 PE=3 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.674e-73
Identity = 128/193 (66.32%), Postives = 154/193 (79.79%), Query Frame = 3
Query:  153 LDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            LD  IE L+  + + E  +  LCLK  E+LV ESNV  VD PVTICGDIHGQ +D+  LF+      K  ++FLGDFVDRGFYS+E+FLLLL  K+RYPDRITLIRGNHE+RQIT+VYGFYDE +RKYG+ NVWRYC ++FDYLSL A+I  +IF VHGGLSP + T+D+IR+IDRKQEVPH+GAMCDLLWSD
Sbjct:    6 LDEIIEYLRYSKHIPEETIYELCLKCQELLVNESNVTHVDTPVTICGDIHGQLHDLLTLFEKSEGIEKNRFIFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVYGFYDEVIRKYGNSNVWRYCCEVFDYLSLGAIINGQIFCVHGGLSPDVMTVDEIRSIDRKQEVPHEGAMCDLLWSD 198          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: FYPP_PEA (Phytochrome-associated serine/threonine protein phosphatase OS=Pisum sativum GN=FYPP PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.674e-73
Identity = 123/194 (63.40%), Postives = 156/194 (80.41%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ I ++K  + L E E++ LC    EIL+EESNVQ V++PVT+CGDIHGQF+D+ +LF+ GG  P+TNY+F+GDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+ N WRYCTD+FDYL+LSA+I+  +  VHGGLSP I T+DQIR I+R  E+PH+G  CDL+WSD
Sbjct:    2 DLDQWISKVKDGQHLLEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSD 195          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: FYPP3_ARATH (Phytochrome-associated serine/threonine protein phosphatase 3 OS=Arabidopsis thaliana GN=FYPP3 PE=1 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.855e-73
Identity = 122/194 (62.89%), Postives = 155/194 (79.90%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ I ++K  + L E E++ LC    EIL+EESNVQ V++PVT+CGDIHGQF+D+ +LF+ GG  P TNY+F+GDFVDRG+ S+E F +LL LK RYP  ITL+RGNHESRQ+TQVYGFYDEC RKYG+ N WRYCTD+FDYL+LSA+I+  +  VHGGLSP + T+DQIR I+R  E+PH+G  CDL+WSD
Sbjct:    2 DLDQWISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPDTNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRLIERNCEIPHEGPFCDLMWSD 195          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: FYPP1_ARATH (Phytochrome-associated serine/threonine protein phosphatase 1 OS=Arabidopsis thaliana GN=FYPP1 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.361e-73
Identity = 121/194 (62.37%), Postives = 156/194 (80.41%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD+ I ++K  + L E E++ LC    EIL+EESNVQ V++PVT+CGDIHGQF+D+ +LF+ GG  P+TNY+F+GDFVDRG+ S+E F +LL LK R+P  ITL+RGNHESRQ+TQVYGFYDEC RKYG+ N WRYCTD+FDYL+LSA+I+  +  VHGGLSP + T+DQIR I+R  E+PH+G  CDL+WSD
Sbjct:    2 DLDQWISKVKDGQHLSEDELQLLCEYVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARHPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDVRTIDQIRLIERNCEIPHEGPFCDLMWSD 195          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP4C_KLULA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Kluyveromyces lactis GN=PPH3 PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.085e-72
Identity = 124/196 (63.27%), Postives = 156/196 (79.59%), Query Frame = 3
Query:  144 MSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            M  LD  IE L++ + + E  + +LC+ A E+L+ ESNV  VD PVTICGDIHGQ +D+  LF   G   K  Y+FLGDFVDRGFYS+E+FLLL+  K+RYPDRI LIRGNHE+RQIT+VYGFYDE +RKYG+ NVWRYC ++FDYL L A++ NK+F VHGGLSP + ++++IRTIDRK+EVPH+GAMCDLLWSD
Sbjct:    1 MMKLDEIIETLRQGKHVDEDSIYSLCVMAQELLMNESNVTHVDTPVTICGDIHGQLHDLLTLFAKSGGIEKNRYIFLGDFVDRGFYSLESFLLLVCYKLRYPDRIVLIRGNHETRQITKVYGFYDEVVRKYGNSNVWRYCCEVFDYLPLGAIVNNKVFCVHGGLSPDVLSINEIRTIDRKKEVPHEGAMCDLLWSD 196          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2AB_DICDI (Probable serine/threonine-protein phosphatase 2A catalytic subunit B OS=Dictyostelium discoideum GN=DDB_G0283187 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.417e-72
Identity = 122/194 (62.89%), Postives = 160/194 (82.47%), Query Frame = 3
Query:  150 DLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            +LD  IE+L+KCE L ES +K +  K  E+L+ ESNVQ + +PVT+ GD+HGQFYD+ E+FK+GG CP TNYLFLGD+VDRG++SVET  LL  LK+RYP RITL+RGNHESRQITQVYGFY EC+RKYG+  VW+Y T++FDYLS++A+I+  I+ VHGGLSP+  ++DQI+ +DR QEVP++GA+ D+LWSD
Sbjct:    7 NLDHCIEKLQKCEILPESTIKEITDKMKELLISESNVQEIRSPVTVVGDVHGQFYDVLEIFKIGGQCPDTNYLFLGDYVDRGYHSVETISLLTCLKLRYPSRITLLRGNHESRQITQVYGFYGECMRKYGNPTVWKYFTEMFDYLSVAAIIDEAIYCVHGGLSPSALSIDQIKVLDRFQEVPNEGALSDILWSD 200          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A3_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 3 OS=Paramecium tetraurelia GN=Ppn3 PE=3 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.157e-72
Identity = 122/197 (61.93%), Postives = 164/197 (83.25%), Query Frame = 3
Query:  141 EMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            ++ ++DRQI +LK+ + L ESE+K+LC+KA EIL +E N+ +V AP+TICGDIHGQF+D+ ELF++GG+ P TNYLFLGD+VDRG  SVETF L+L+LKVRY DRI L+RGNHE+R+I +VYGFYDEC RKYG+  VW+  T++F YL LSA++E +IF  HGGLSPA+ ++DQI+ ++R Q++PH+G MCDLLWSD
Sbjct:   11 DIGNIDRQIAKLKQGQILTESEIKSLCIKAKEILSDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKVYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNRVQDIPHEGLMCDLLWSD 207          
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP2A1_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia GN=Ppn1 PE=3 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 3.157e-72
Identity = 122/197 (61.93%), Postives = 163/197 (82.74%), Query Frame = 3
Query:  141 EMSDLDRQIEQLKKCEPLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            E+ ++DRQI +LK+ + L E EVK+LC+KA EIL +E N+ +V AP+TICGDIHGQF+D+ ELF++GG+ P TNYLFLGD+VDRG  SVETF L+L+LKVRY DRI L+RGNHE+R+I ++YGFYDEC RKYG+  VW+  T++F YL LSA++E +IF  HGGLSPA+ ++DQI+ ++R Q++PH+G MCDLLWSD
Sbjct:   11 EIGNIDRQIAKLKQGQILSEQEVKSLCIKAKEILQDEPNIIQVRAPLTICGDIHGQFHDLIELFQIGGNLPDTNYLFLGDYVDRGSQSVETFSLMLSLKVRYKDRIVLLRGNHENREINKIYGFYDECFRKYGNEIVWKQFTEVFGYLPLSAIVEQQIFCAHGGLSPAMESVDQIKQLNRVQDIPHEGLMCDLLWSD 207          
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP4C_CANGA3.984e-7567.53Serine/threonine-protein phosphatase 4 catalytic s... [more]
PPP6_DROME9.813e-7461.73Serine/threonine-protein phosphatase 6 catalytic s... [more]
PP4C_ASHGO1.674e-7366.32Serine/threonine-protein phosphatase 4 catalytic s... [more]
FYPP_PEA1.674e-7363.40Phytochrome-associated serine/threonine protein ph... [more]
FYPP3_ARATH2.855e-7362.89Phytochrome-associated serine/threonine protein ph... [more]
FYPP1_ARATH6.361e-7362.37Phytochrome-associated serine/threonine protein ph... [more]
PP4C_KLULA1.085e-7263.27Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2AB_DICDI1.417e-7262.89Probable serine/threonine-protein phosphatase 2A c... [more]
PP2A3_PARTE3.157e-7261.93Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_PARTE3.157e-7261.93Serine/threonine-protein phosphatase PP2A catalyti... [more]

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Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
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