CX288011

Overview
NameCX288011
Unique NameCX288011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1G_RAT (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Rattus norvegicus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1G_MOUSE (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Mus musculus GN=Ppp1cc PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1G_HUMAN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Homo sapiens GN=PPP1CC PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1G_BOVIN (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit OS=Bos taurus GN=PPP1CC PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1GB_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit B OS=Xenopus laevis GN=ppp1cc-B PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1GA_XENLA (Serine/threonine-protein phosphatase PP1-gamma catalytic subunit A OS=Xenopus laevis GN=ppp1cc-A PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 93/180 (51.67%), Postives = 134/180 (74.44%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L+E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.473e-53
Identity = 94/180 (52.22%), Postives = 132/180 (73.33%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L ESE++ LCL + EIL E+ N+  ++AP+ ICGDIHGQ+ D+  LF+ GG  P+ NYLFLGD+VDRG  S+ET  LLLA K++YP+   ++RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KI  +HGGLSP + TL+QIR I R  +VP  G +CDLLW+D
Sbjct:   27 LTESEIRLLCLTSKEILSEQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIRLWKTFTDCFNCLPVAAIVDEKILCMHGGLSPELKTLEQIRRIPRPTDVPDTGLLCDLLWAD 205
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1A_CANFA (Serine/threonine-protein phosphatase PP1-alpha catalytic subunit OS=Canis familiaris GN=PPP1CA PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.924e-53
Identity = 93/180 (51.67%), Postives = 133/180 (73.89%), Query Frame = 3 
Query:  192 LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            L E+E++ LCLK+ EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P++NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+++ KIF  HGGLSP + +++QIR I R  +VP  G +CDLLWSD
Sbjct:   30 LTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDXFNXLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 208
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.924e-53
Identity = 95/203 (46.80%), Postives = 141/203 (69.46%), Query Frame = 3 
Query:  144 MSDLDRQIEQLKKCEP-------LKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            + D+ R++ + +   P       L E E++ LC  + EI +++ N+  ++AP+ ICGDIHGQ+ D+  LF+ GG  P+ NYLFLGD+VDRG  S+ET  LLLA K++YP+   L+RGNHES  I ++YGFYDEC R++ +V +W+  TD F+ L ++ALI+++I  +HGG+SP + +LDQIR I R  ++P  G +CDLLWSD
Sbjct:   20 LDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSD 221
[Close]
BLAST of CX288011 vs. ExPASy Swiss-Prot
Match: PP1_EMENI (Serine/threonine-protein phosphatase PP1 OS=Emericella nidulans GN=bimG PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.513e-53
Identity = 97/202 (48.02%), Postives = 142/202 (70.30%), Query Frame = 3 
Query:  150 DLDRQIEQLKKCE--------PLKESEVKALCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSD 731
            DLD  I++L +           L ESE++ LC KA EI + +  +  ++AP+ ICGDIHGQ+YD+  LF+ GG  P+ NYLFLGD+VDRG  S+ET  LLLA K++YP+   ++RGNHE   I ++YGFYDEC R+Y ++ +W+  TD F+ L ++A+I+ KIF++HGGLSP +++++QIR + R  ++P  G +CDLLWSD
Sbjct:    7 DLDSIIDRLLEVRGSRPGKQVQLLESEIRYLCTKAREIFISQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFVLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMEQIRRVMRPTDIPDCGLLCDLLWSD 207
The following BLAST results are available for this feature:
BLAST of CX288011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
PP1G_RAT1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_MOUSE1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_HUMAN1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1G_BOVIN1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GB_XENLA1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP1GA_XENLA1.473e-5351.67Serine/threonine-protein phosphatase PP1-gamma cat... [more]
PP11_ACECL1.473e-5352.22Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1A_CANFA1.924e-5351.67Serine/threonine-protein phosphatase PP1-alpha cat... [more]
PP11_ARATH1.924e-5346.80Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1_EMENI2.513e-5348.02Serine/threonine-protein phosphatase PP1 OS=Emeric... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01015G12SK Veg1 Citrus clementina cDNA clone C01015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288011 ID=CX288011; Name=CX288011; organism=Citrus clementina; type=EST; length=733bp
AAAAGTTTGTAGATGCAGAAGGATTCATTCATTCACGCAGAGTAGGTGAC
AGAGAGACACAAGCCGCGGCTCAAAATCGGGCGAGCATCAGTTAGGTTAG
AGGAACTCAAGTGAAGTGAAGTGAAGGGAAGATAAAAAAAGAGATGTCGG
ATTTAGATAGGCAAATAGAGCAGCTGAAGAAATGCGAGCCGTTGAAAGAG
TCGGAGGTTAAAGCCCTTTGTCTCAAAGCCATGGAAATCCTCGTCGAAGA
AAGCAACGTTCAACGTGTTGACGCCCCTGTCACTATATGCGGTGACATCC
ATGGGCAGTTCTATGACATGAAAGAGCTTTTTAAAGTAGGGGGTGACTGC
CCAAAGACAAATTATTTGTTTCTTGGAGATTTTGTTGACAGAGGATTTTA
CTCCGTCGAGACGTTTCTACTTCTGCTTGCCCTTAAGGTGAGATATCCAG
ATCGGATAACACTCATTAGAGGGAACCATGAAAGTCGTCAGATCACACAG
GTATATGGATTCTATGATGAATGCCTACGTAAATATGGCTCTGTGAATGT
TTGGAGATATTGCACCGATATTTTTGATTATTTAAGTTTGTCTGCTCTCA
TAGAGAACAAGATTTTTAGTGTCCATGGTGGTCTCTCTCCTGCCATCTCA
ACATTGGATCAGATTCGAACAATTGATCGTAAACAAGAAGTACCTCATGA
TGGTGCCATGTGTGACCTTCTGTGGTCAGATCC
back to top