CX288067

Overview
NameCX288067
Unique NameCX288067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288067 vs. ExPASy Swiss-Prot
Match: H32_TETBO (Histone H3.2 (Fragment) OS=Tetrahymena borealis PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.894e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 2 
Query:   23 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 145
            MAR KQTARKSTG +APRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARAKQTARKSTGAEAPRKQLASKAARKSAPATGGIKKPHR 41
The following BLAST results are available for this feature:
BLAST of CX288067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_TETBO4.894e-1385.37Histone H3.2 (Fragment) OS=Tetrahymena borealis PE... [more]

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Properties
Property NameValue
Genbank descriptionC01016D09SK Veg1 Citrus clementina cDNA clone C01016D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288067 ID=CX288067; Name=CX288067; organism=Citrus clementina; type=EST; length=675bp
GAAGAGTTGAAGAAACTCAGAGATGGCCCGTACCAAGCAAACTGCACGTA
AGTCAACCGGAGGAAAGGCTCCTAGGAAGCAACTTGCTACCAAGGCCGCC
CGTAAGTCTGCGCCCACCACCGGTGGTGTTAAGAAGCCTCATCGTTACCG
TCCTGGAACCGTCGCCCTTCGAGAAATTCGCAAGTACCAGAAGAGTACCG
AGCTGCTTATCAGGAAACTCCCATTCCAGAGACTTGTTCGTGAAATTGCT
CAGGACTTTAAGACTGATCTGCGTTTCCAGAGCCATGCAGTACTGGCCCT
GCAGGAGGCAGCGGAGGCTTACCTTGTTGGTCTCTTCGAGGACACTAACC
TCTGCGCCATTCATGCAAAGCGTGTCACTATTATGCCCAAGGACATACAG
CTTGCCCGTAGGATCCGTGGCGAGCGTGCTTAAGCGTAATTGCTGCTTGC
TTCAATTGAATGACTGGAAGGGAAGGGGGAAGTTGTAATGTGTTAATTTG
TACGTGGGGGTTGGTGGGGGTAGATAGGGGTAGGATTCCAGTNGTTATTA
GAATATGGCTTTTGTCATCATCTGGGTTTGTTTTTGGTGGTGTTTTATAA
TGTCTATTTGTTGATGATGGGGATTTTAATTCGCCATAAGAGACTGGCTT
TTATGTGTTCTTTTGGATACCTGTT
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