CX288126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIA_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 3.132e-66 Identity = 125/214 (58.41%), Postives = 152/214 (71.03%), Query Frame = 1 Query: 52 SSKSGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWW 687 S + G F P A KPA+ + + C A S D VPDMGKR+LMNLLLLGA++ P P+ +F PP G AG G AKDA+GND+ + WL TH PGDR+L +GLKGD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+ G+VVRGPAPLSLALAH ++ E+G V F PWTETDFRT APWW Sbjct: 36 SKQVGSFKPVFA-AAKPAKETTFS-------VSCSAAS---DDVPDMGKRKLMNLLLLGAIAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLKGDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVSVLEDGVVAFEPWTETDFRTNTAPWW 238
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRI_TRIEI (Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium erythraeum (strain IMS101) GN=petC PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.112e-66 Identity = 111/169 (65.68%), Postives = 132/169 (78.11%), Query Frame = 1 Query: 181 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 687 VP MG+RQ MNLL G V+ L P +F PP G +GGG TAKDA+GNDII +++L H G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLAL HAN+ + K+VF W ETDFRTGE PWW Sbjct: 10 VPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDALGNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGSENKFICPCHGSQYDNTGKVVRGPAPLSLALVHANVSDDKLVFTQWEETDFRTGEKPWW 178
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIA_CHLRE (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.554e-65 Identity = 116/198 (58.59%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 100 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 690 PA+ + ++ + ++ A S VPDM KR +MNL+L G LP + + Y FF PP G GGG AKDA+GNDI A +WL TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH ++ E+G V F WTETDFRTG PWWA Sbjct: 12 PAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYGAFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVAESGLVTFSTWTETDFRTGLEPWWA 206
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIA_VOLCA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Volvox carteri GN=petC PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.030e-65 Identity = 117/198 (59.09%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 100 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 690 P + Q ++ + ++ A S VPDM KR +MNL+LLG SLP G + + Y FF PP G GG AKDA+GNDI A WL TH GDR+L++GLKGDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH ++ E+G V F W+ETDFRTG PWWA Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFFVPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWWA 206
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIA_ANAVT (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.906e-65 Identity = 111/170 (65.29%), Postives = 129/170 (75.88%), Query Frame = 1 Query: 181 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 690 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA EN K+V PWTETDFRTGE PWW+ Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTPWTETDFRTGEEPWWS 179
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIB_CYAPA (Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.007e-64 Identity = 128/233 (54.94%), Postives = 152/233 (65.24%), Query Frame = 1 Query: 7 ARGSSLSSATPSQLCSSKSG----MFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWW 687 ARG+ A S +C+ ++G + + KP I C A S D VPDMGKR+LMNLLLLGA++ PT P+ +F PP G AG G AKDA GNDI WL T PGDR+L +GLKGD TYL+V++D TL YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+ G+VVRGPAPLSLALAH N+ E+G V F PWTETDFRT APWW Sbjct: 13 ARGAI--KANSSSVCAIENGKAVAVGTSKQVGAFKPVFAAAKAAKATTFSISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSFLVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLEKYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPLSLALAHVNVLEDGVVAFEPWTETDFRTNTAPWW 240
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRI_SYNP2 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.316e-64 Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 1 Query: 181 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 690 VPD+G+RQ +NLL +G + L P +F PP G AGGG AKDA+GNDII +D+L TH GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCHGSQY+ G+VVRGPAPLSLAL HA + E+ K+ F WTETDFRT EAPWWA Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDYLQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCHGSQYDETGKVVRGPAPLSLALVHAEVTEDDKISFTDWTETDFRTDEAPWWA 180
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRI_CYAP4 (Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.244e-64 Identity = 109/169 (64.50%), Postives = 128/169 (75.74%), Query Frame = 1 Query: 181 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 687 VPDMG+RQ MNLL G+ + ML P +F PP G GGG AKDA+GNDI +D+L H DR L +GLKGDPTY+VV+ D T+ YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY+N G+VVRGPAPLSLALAHA + + K+ F PWTETDFRTG+ PWW Sbjct: 10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDFLAKHPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCHGSQYDNTGKVVRGPAPLSLALAHAAVSDDKITFTPWTETDFRTGKEPWW 178
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRIA_ANASP (Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=petC1 PE=1 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64 Identity = 110/170 (64.71%), Postives = 128/170 (75.29%), Query Frame = 1 Query: 181 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 690 VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCHGSQY+ G+VVRGPAP SLAL+HA EN K+V WTETDFRTGE PWW+ Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKFLESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCHGSQYDATGKVVRGPAPKSLALSHAKTENDKIVLTSWTETDFRTGEEPWWS 179
BLAST of CX288126 vs. ExPASy Swiss-Prot
Match: UCRI_SYNPW (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain WH7803) GN=petC PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.900e-63 Identity = 109/177 (61.58%), Postives = 132/177 (74.58%), Query Frame = 1 Query: 160 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 690 T +PA VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN + A+ WL+TH GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ ++EN V WT+TDFRTGE PWWA Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGNAVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVENDNVFVSQWTDTDFRTGEKPWWA 178 The following BLAST results are available for this feature:
BLAST of CX288126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288126 ID=CX288126; Name=CX288126; organism=Citrus clementina; type=EST; length=696bpback to top |