CX288186
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.280e-20 Identity = 54/124 (43.55%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSI 380 G G LKE P+I V +EP+ S +LSGGKPG HK+ G GF+P L+E V DE+I++S ++A ++LA +EG+LVG SSG +E KR + K++ + GERYLS+ L+ I Sbjct: 189 GTGEALKELFPDITVHVVEPAGSPVLSGGKPGAHKLVGTSPGFIPPILNEDVYDEIIKISDEDAYTTTRRLAAEEGILVGPSSGAACFAAIETAKR-LSPDKVVVCMTADTGERYLSTDLWSFI 311
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSM_CAMJE (Cysteine synthase B OS=Campylobacter jejuni GN=cysM PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 56/122 (45.90%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKR-PENAGKLIAVVFPSFGERYLSSVLF 371 G G LKEK + ++G+EP S +LS G+ G HKIQGIGA F+P L++ V+DEVI VS+++A+ AK+LA + GL+VGISSG + K+ P+ K I + ERYLS+ LF Sbjct: 181 GVGEILKEKLEKVHIVGVEPLNSPLLSKGEAGSHKIQGIGANFIPAILNKEVIDEVITVSNEDAINTAKELA-KSGLMVGISSGANVFAASMLAKKFPD---KRILTMLNDTAERYLSTDLF 298
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSM_HELPJ (Cysteine synthase OS=Helicobacter pylori J99 GN=cysM PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.930e-19 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVP---RNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXM-EVGKRPENAGKLIAVVFPSFGERYLSSVLF 371 G +YLKE+ PNI++IG+EP E +IL+GG+PGPH+I+GIG F+P NLD +D +S +E ++LA + GLLVG SSG + EV + PE G + +FP +RYLS ++ Sbjct: 186 GMAKYLKERIPNIRLIGVEP-EGSILNGGEPGPHEIEGIGVEFIPPFFANLD---IDRFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFAAALKEVQRLPE--GSQVLTIFPDMADRYLSKGIY 304
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: MCCA_BACSU (O-acetylserine dependent cystathionine beta-synthase OS=Bacillus subtilis GN=mccA PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.292e-19 Identity = 49/122 (40.16%), Postives = 74/122 (60.66%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQ 374 G +LKEKNP +K + +EP S IL+GG+P HK +GIG F+P +D+ DE+ V+ + A + K+ A +EGLL+G SSG +E K+ +AG I VFP +RY+S +++ Sbjct: 185 GTASFLKEKNPAVKTVIVEPVGS-ILNGGEPHAHKTEGIGMEFIPDYMDKSHFDEIYTVTDENAFRLVKEAAEKEGLLIGSSSGAALYAALEEAKK-ASAGTNIVTVFPDSSDRYISKQIYE 304
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSM_HELPY (Cysteine synthase OS=Helicobacter pylori GN=cysM PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.578e-19 Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKR-PENAGKLIAVVFPSFGERYLSSVLF 371 G RYLKE+ P I++IG+EP E +IL+GG+PGPH+I+GIG F+P + +D +S +E ++LA + GLLVG SSG ++ +R PE G + +FP +RYLS ++ Sbjct: 187 GTARYLKERIPAIRLIGVEP-EGSILNGGEPGPHEIEGIGVEFIPPFFENLDIDGFETISDEEGFSYTRKLAKKNGLLVGSSSGAAFVAALKEAQRLPE--GSQVLTIFPDVADRYLSKGIY 305
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.081e-17 Identity = 45/80 (56.25%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVG 248 G + LKEK PN+KVI +EP S +LSGG P PH +QG+GAGFVP LD +LD VI V DEA E A A +EGL G Sbjct: 183 GIAKALKEKYPNLKVIAVEPELSPVLSGGSPAPHPLQGLGAGFVPSILDITLLDGVITVGKDEAYEYAINAAKKEGLFCG 262
BLAST of CX288186 vs. ExPASy Swiss-Prot
Match: CYSM_PSEAE (Cysteine synthase B OS=Pseudomonas aeruginosa GN=cysM PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 38/121 (31.40%), Postives = 71/121 (58.68%), Query Frame = 3 Query: 9 GAGRYLKEKNPNIKVIGIEPSESNILSGGKPGPHKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLF 371 G RYLKE+NP ++++G++P E + + G + P + ++P+ D +D V+++ DEA +I ++LA +EG+ G+SSG + + + ENA ++ + G+RYLSS ++ Sbjct: 185 GVSRYLKEQNPAVQIVGLQPMEGSAIPGIRRWPQE-------YLPKIYDASRVDRVVDMHQDEAEDIMRRLAREEGIFCGVSSGGAVAAMLRLSRELENA--VLVAIICDRGDRYLSSGVY 296 The following BLAST results are available for this feature:
BLAST of CX288186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288186 ID=CX288186; Name=CX288186; organism=Citrus clementina; type=EST; length=652bpback to top |