CX288189

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPAC1_HUMAN (DNA-directed RNA polymerases I and III subunit RPAC1 OS=Homo sapiens GN=POLR1C PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.324e-20
Identity = 64/205 (31.22%), Postives = 113/205 (55.12%), Query Frame = 1

Query:   76 DGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSE-RAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKC---------HSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQ--QRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            D   +++  +V +  + ++  +F++   DA++ANA RR+++AEVPT+A++ V +  N+S++ DE +AHRLGLIP+ ++ R    R   D +  + D      +++F L+ +C          SD      +  +Y+   + +P+        + T +     I+I +LR GQE+ L     KGIGKDHAK+SP AT ++   P+I
Sbjct:   41 DQDRFEKNFRVDVVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPRLFEYRNQGDEEGTEID------TLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDI 239          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRKO (DNA-directed RNA polymerase subunit D OS=Pyrococcus kodakaraensis GN=rpoD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 69/170 (40.59%), Postives = 83/170 (48.82%), Query Frame = 1

Query:  109 KIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 618
            KI E + D  KF +   D   ANALRR +++EVPT A+D VE   N S L DE IAHRL +IPLT+      RFS D    D          ++ +     ++    V S DL SSD  V P +               I IVKL  GQ L   A AR G GKDHAKW P
Sbjct:    5 KILEKRPDSIKFIVSGVDVPFANALRRTILSEVPTFAVDEVEFLENDSALFDEIIAHRLAMIPLTTPHE---RFSLDALELD----------DYTVTLSLEAEGPGMVYSGDLKSSDGDVKPAN-------------PNIPIVKLAEGQRLTFNAYARLGRGKDHAKWQP 148          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRFU (DNA-directed RNA polymerase subunit D OS=Pyrococcus furiosus GN=rpoD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.176e-20
Identity = 69/172 (40.12%), Postives = 85/172 (49.42%), Query Frame = 1

Query:  103 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP 618
            +V+I E K+D  KF L+    S ANALRR ++ EVPT A+D VE   N S L DE IAHRL +IPLT+      RF  D    D          ++ +     ++    V S DL S D  V PV+               I IVKL  GQ L   A A+ G GKDHAKW P
Sbjct:    5 EVQILEKKEDSIKFVLKGVHVSFANALRRTILGEVPTFAVDEVEFYENDSALFDEIIAHRLAMIPLTTP---VDRFELDALELD----------DYTVTLSLEAEGPGIVYSGDLKSDDPDVKPVN-------------PNIPIVKLAEGQRLVFNAYAKLGRGKDHAKWQP 150          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_METS3 (DNA-directed RNA polymerase subunit D OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpoD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.176e-20
Identity = 68/190 (35.79%), Postives = 96/190 (50.53%), Query Frame = 1

Query:  103 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDG------DGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            +++++   DD   F +RD +    NA+RR  +  VP IAI+ V I  N S + +E +AHRLGL PL S          + DA +G      D   E  SV F L+     +    V SKDL SSD  + PV       YD+      I +VKL+ G++L + A+A+ G GK+HAKW P     +   PEI
Sbjct:    2 EIEVKSQTDDEIVFIVRDAEVPFINAIRRCAMVNVPKIAIEDVNIMRNDSAMFNEVLAHRLGLTPLVS----------NMDAIEGLPLPGDDDYEENNSVMFSLK----EEGPKVVYSKDLISSDSKIKPV-------YDT------IPLVKLKEGEKLNIEAVAKVGYGKEHAKWMPTTVCVYKQYPEI 164          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRIL (DNA-directed RNA polymerase subunit D OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpoD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.761e-20
Identity = 70/185 (37.84%), Postives = 97/185 (52.43%), Query Frame = 1

Query:  100 PKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            PK  I E    + K  +     S+ N++RRV+I+E+P +AID V I  N+SV+ DE +AHRLGL+PLT+    ++    DC+   G      C+V   L+    SD+   V S DL S    VVPV              + I IVKL +GQ + L A A+ G  K+HAKW  AA  ++ Y P I
Sbjct:    2 PKATIVEKTPLFLKAVIEGAYPSLVNSIRRVIISELPVMAIDYVVIVSNTSVMYDEMLAHRLGLVPLTTP-LQALPPIEDCET--GLVDPSECTVRLMLQINAESDKI--VYSGDLVSERPDVVPV-------------YKDIPIVKLVKGQSIILEAYAKLGRAKEHAKWQ-AALASYYYYPRI 167          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_METTH (DNA-directed RNA polymerase subunit D OS=Methanobacterium thermoautotrophicum GN=rpoD PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 63/185 (34.05%), Postives = 90/185 (48.65%), Query Frame = 1

Query:  106 VKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTS--ERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            + ++E  D    F +        NA+RR+ + EVP +AI+ V +  N + + DE +AHRLGL+PL +  E A S++   +CD    +  C  CSV   LR K        V S DL S   +V PV                I +VKL    EL L A+A+ G+G++HAKW P     + Y P I
Sbjct:    3 IALKEKTDTEMVFVVSGVTVPFINAIRRICMMEVPKLAIEYVNMYRNDAKMFDEVLAHRLGLVPLAADPEFAESLKMPEECDC---EEYCSECSVSLTLRKKGPG----VVYSGDLVSETPAVKPV-------------YPDIPLVKLGDDDELELEAVAQLGVGREHAKWEPTTACAYKYYPRI 167          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRCJ (DNA-directed RNA polymerase subunit D OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpoD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.475e-19
Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 1

Query:  100 PKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEI 654
            PKV I E    +AK  +     S+ N+LRRV+I+E+P +AID V +  N+SV+ DE +AHRLGLIPLT+     +    DC++  G      C+V   L+     D  + V + DL +    V PV              + I IVKL  GQ + + A A+ G  +DHAKW  AA  ++ Y P++
Sbjct:    2 PKVSIVEKSQFFAKAVVEGVPPSLINSLRRVIISELPVLAIDSVVVVNNTSVMYDEMLAHRLGLIPLTTP-LKDLPPIEDCES--GLVDPSECTVRLTLQVNATGD--VVVYAGDLVADRPDVAPV-------------YKDIPIVKLVEGQSVVVEAYAKLGRARDHAKWQ-AALASYYYYPKV 167          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRAB (DNA-directed RNA polymerase subunit D OS=Pyrococcus abyssi GN=rpoD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.275e-18
Identity = 66/175 (37.71%), Postives = 83/175 (47.43%), Query Frame = 1

Query:  103 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 627
            ++KI +  DD   F L   D + ANALRR ++ EVPT A+D VE   N S L DE IAHRL +IPL   +    RF  D    D          ++ +     ++    V S DL S D  V P +               I IVKL +GQ L   A A+ G GKDHAKW P  T
Sbjct:    3 EIKILKKTDDSITFILEGVDVAFANALRRTILGEVPTFAVDEVEFYENDSALFDEIIAHRLAMIPL---KTPVDRFELDALELD----------DYTVTLSLEAEGPGIVYSGDLKSDDPDVKPAN-------------PDIPIVKLAKGQRLVFNAFAKLGRGKDHAKWQPGFT 151          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PYRHO (DNA-directed RNA polymerase subunit D OS=Pyrococcus horikoshii GN=rpoD PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18
Identity = 66/175 (37.71%), Postives = 83/175 (47.43%), Query Frame = 1

Query:  103 KVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAAT 627
            K+KI +  +D   F L     + ANALRR ++ EVPT A+D VE   N S L DE IAHRL +IPL   +  + RF  D    D          ++ +     ++    V S DL S D  V PV                I IVKL +GQ L   A A+ G GKDHAKW P  T
Sbjct:    3 KIKILKKTEDSITFILEGVSVAFANALRRTILGEVPTFAVDEVEFYENDSALFDEIIAHRLAMIPL---KTPTDRFELDALELD----------DYTVTLSLEAEGPGIVYSGDLKSDDPDVKPV-------------TPDIPIVKLAKGQRLVFNAYAKLGRGKDHAKWQPGFT 151          

BLAST of CX288189 vs. ExPASy Swiss-Prot
Match: RPOD_PICTO (DNA-directed RNA polymerase subunit D OS=Picrophilus torridus GN=rpoD PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18
Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 1

Query:  112 IRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLV------------EIEVNSSVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDVTSKDLYSSDHSVVPVDFVDPAGYDSTDQQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPE 651
            I ELKD+Y KF +     ++AN++RR +I ++P +AI+ V             +  +S  L DE +A RLGLIPL ++  M+ R   D  +C+G+G C+ C+V++ +           +   D++SSD  ++P++  D    D       I IVKL++GQ + +   A  G GKDHAKW   + V++ Y  E
Sbjct:    4 IIELKDNYIKFSISGITPAIANSIRRTLINDIPKLAIENVVFHHGEIRDSEGNVYDSSLPLFDEVVALRLGLIPLKTDLKMNFR---DQCSCNGEG-CDLCTVKYSINK---------LGPADVFSSD--LIPINNPDLKPVDPM-----IPIVKLKKGQAMLVTCEAIMGRGKDHAKWQVTSGVSYKYHRE 175