CX288192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 45/175 (25.71%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 9 TRARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEG 521 T A +R ++GPKG + +L+ G I NDG T+ + +++++ + AKL+ E++ GDGTT V+A S++++ K + G +P+ + G E + V+ ++ +A+ E + V T ++++ + ++ V+ V E K ++ DL VEG Sbjct: 21 TLADAVRITMGPKGRNVLLEKKYGAPQIVNDGITVAKDIELEDPLENTGAKLIQEVASKTKDIAGDGTTTATVLAQSMIKEGLKNVAAGANPVAVRRGIEKTVSLLVKEIQTVAKPVE---GEAIAQVATVSAGGDAEVGRMISEAMDKVTKDGVITVE--ESKSLSTDLEVVEG 190
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: CH601_SACEN (60 kDa chaperonin 1 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 9 TRARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 350 T A ++ +LGPKG + +L+ G TITNDG +I +++++++ A+L+ E+++ D GDGTT V+A +L+ + + + G PI + G E A+ E L + A++ E Sbjct: 21 TLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGASPIALKRGIEKATEAIAEQLLKSAKEIE 138
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: CH601_CORJK (60 kDa chaperonin 1 OS=Corynebacterium jeikeium (strain K411) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.508e-11 Identity = 55/217 (25.35%), Postives = 101/217 (46.54%), Query Frame = 3 Query: 9 TRARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPF 647 T A ++ +LGPKG + +L+ G TITNDG TI ++++++ A+L+ E+++ D GDGTT V+A SL+ + + + G +P+ I G + +E+I + ++E Q T ++ ++ E+ +A+ V D + + ++ G LE TE G+ DK +E + A+L P+ Sbjct: 21 TLADAVKVTLGPKGRNVVLERKWGAPTITNDGVTIAREIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVREGLRNVAAGSNPMGIKRGIQAG-------VEKITAELLSHAKEIETQEQIAATA----GISAADEKIGELIAEAMYKVGDGKLNKDGVITVEESNAFGVNLEVTE---GMRFDKGYISGYFATDVERGE-AVLEDPY 222 The following BLAST results are available for this feature:
BLAST of CX288192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288192 ID=CX288192; Name=CX288192; organism=Citrus clementina; type=EST; length=648bpback to top |