CX288192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.777e-41 Identity = 94/208 (45.19%), Postives = 143/208 (68.75%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVAD-LERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ + L+D E L+ + T+LNSK+V++ L+ ++V AV+ V D V+L IK+ K+GG ++D EL+ G+ + + +++ + R+E AKI ++ Sbjct: 45 ADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ--LSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGI-TRVEKAKIGLI 249
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.777e-41 Identity = 94/208 (45.19%), Postives = 143/208 (68.75%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVAD-LERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+Q GDVTITNDGATIL+QM V + A+++VELS++QD E GDGTT VV++AGSLL+ KLL++GIHP I+E ++ A +E L +++ + L+D E L+ + T+LNSK+V++ L+ ++V AV+ V D V+L IK+ K+GG ++D EL+ G+ + + +++ + R+E AKI ++ Sbjct: 45 ADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQ--LSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGI-TRVEKAKIGLI 249
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.152e-40 Identity = 90/208 (43.27%), Postives = 144/208 (69.23%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +A+++VE+S +QD E GDGTT VV++ G+LL AE+LL +GIHP IA+ ++ A++ +V+ L + K L+D E LV+ T+L+SK+V++ LA +AV +VL ++D K+V+L+ I++ KVGG ++DTE+I G+ + + + P R E AKI ++ Sbjct: 32 ADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK--VSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLI 237
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.964e-40 Identity = 93/207 (44.93%), Postives = 129/207 (62.32%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A +RT+LGPKGMDKML G V +TNDG TIL++MD+D+ A ++VE+S +Q+ E+GDGTT V+ AG LL+QAE LL+ +H IA+GY A+ A E LE A E +D E L + T + K K L+E+ V AVLAV D + D N + +E VGG ++++EL+ G+ VDK+ MP +E+A IAIL Sbjct: 38 AEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKAKEVLEDNA--IEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDAVLAVKDDDGIDTN--NVSIEKVVGGTIDNSELVEGVIVDKERVDENMPYAVEDANIAIL 240
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 2.565e-40 Identity = 89/207 (43.00%), Postives = 133/207 (64.25%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A +RT+LGPKGMDKML G+V +TNDG TIL++MD+++ A ++VE++ +Q+ E+GDGTT VV++G LL +AE LLE+ IH +A+GY A+ A E L+ A + +D E L + T + K K L+++ V+AV +VAD DV+ D +KVE GG +E++ELI G+ VDK+ MP +E+A IA++ Sbjct: 37 AESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKAKELLDDAA--IDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAVQSVAD--DNDVDTDNVKVEKVTGGAIENSELIEGVIVDKERVSENMPYAVEDANIALV 239
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_DICDI (T-complex protein 1 subunit delta OS=Dictyostelium discoideum GN=cct4 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.565e-40 Identity = 96/209 (45.93%), Postives = 140/209 (66.99%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVAD-LERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQ-MPKRIENAKIAIL 635 A +RTSLGPKGMDKM+ SP+ +V I+NDGATIL+ +++ + AK++ EL+++QD E GDGTT V V+AGSLL +L+ +GIHP I+E + +A ++E L ++ L D LV++ T+LNSK+V++ LA IAV AVL+V + +VNL IK+ K+GG +EDTEL+ G+ D+ SH P RI+NAKI ++ Sbjct: 39 ADAIRTSLGPKGMDKMIISPNNEVLISNDGATILQNLELRHPAAKMLAELAKAQDIEAGDGTTSVCVIAGSLLGAVSQLMAKGIHPSIISEAFNLALNKSLEVL--VSMSVPVSLTDRVSLVKSATTSLNSKVVSQ-YTNLASIAVDAVLSVINPATAVNVNLKDIKLIKKLGGTIEDTELVQGLVFDQTASHTAGGPTRIQNAKIGLI 244
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.715e-40 Identity = 87/205 (42.44%), Postives = 143/205 (69.76%), Query Frame = 3 Query: 24 LRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAIL 635 +RTSLGPKGMDKM+++ +G++ I+NDGATIL+ M V + A+++V++S +QD E GDGTT V ++ GSLL AEKLL +GIHP I+E ++ A+ + E L ++ K L+D E L++ T+L+SK+V++ L+ +AV +VL V + E +V+L+ I++ KVGG +++TEL+ G+ + ++ + P R++ AKIA++ Sbjct: 40 IRTSLGPKGMDKMIKTKNGEIIISNDGATILKHMAVLHPAARMLVDVSAAQDVEAGDGTTSVAILTGSLLGAAEKLLNKGIHPTLISESFQRAATRSAEVLLEMSHK--ISLDDKEALIRAASTSLSSKIVSQHSSLLSPLAVNSVLKVMNEEHTNVDLNDIRLIKKVGGTIDETELVNGVVLTQNVVKTAGGPVRVDKAKIALI 242
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.715e-40 Identity = 92/211 (43.60%), Postives = 142/211 (67.30%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGI----TVDKDMSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++V++S +QD E GDGTT VV++ G+LL A++LL +GIHP IAE ++ A+R +VE L I L+D E L++ T+L+SK+V++ L+ +AV AVL++ + + K V+L+ I++ KVGG + DTE++ G+ TV K P M E AKI ++ Sbjct: 33 ADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVAKMLVDVSAAQDSEAGDGTTSVVILTGALLGAADRLLNKGIHPTIIAESFQKAARRSVETLLEICH--PVSLDDREDLIRAASTSLSSKIVSQYSSFLSPLAVDAVLSITEKDSKTVDLNDIRLVKKVGGTIGDTEMVDGVVLTQTVVKTAGGPTMK---EKAKIGLI 238
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.464e-40 Identity = 90/208 (43.27%), Postives = 143/208 (68.75%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+++ G++ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV++ G+LL AEKLL +GIHP IAE ++ A + AVE L ++++ L D LV+ T+L+SK+V++ LA +AV VL++ + +V+L+ I++ KVGG ++DTE++ G+ + ++ + P R+E AKI ++ Sbjct: 33 ADAIRTSLGPKGMDKMIKTARGEILISNDGHTILKQMAILHPVAKMLVEVSAAQDSEAGDGTTSVVILTGALLGAAEKLLAKGIHPTIIAESFQRAGQRAVEVLLGMSKR--ISLQDRAELVRAASTSLSSKIVSQYSTFLAPLAVDCVLSLTNEASTNVDLNDIRLVKKVGGTIDDTEMVDGVVLTQNIVKSAGGPVRMEKAKIGLI 238
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.408e-38 Identity = 94/212 (44.34%), Postives = 132/212 (62.26%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKM--VNRCKRRLAEIAVKAVLAVADLERKDVNLDL--IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 +L++SLGPKG+DKML DVTITNDGATI++ M+V + AKL++E +++ D E+GDGTT VVV+AG LLE+AE LL + IHP I EGY A ++E L+ IA K D + + TTL+SK ++ + + A LAV D +LD+ IK+ GG +D+ELI GI VDK+ ++ MPKR+EN K+ + P Sbjct: 31 MLKSSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADK--ISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDASLAVLDKRDGSYDLDIKNIKIVKVNGGEFDDSELINGIVVDKEPTNENMPKRVENVKVMLADFP 239 The following BLAST results are available for this feature:
BLAST of CX288192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288192 ID=CX288192; Name=CX288192; organism=Citrus clementina; type=EST; length=648bpback to top |