CX288192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.096e-38 Identity = 89/214 (41.59%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKD----VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 A +R++LGPKGMDKML GDVTITNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLE+ IHP I G+ +AS A E ++ IA++ + +D E L + T++ K K LA++ V+AV V +E D V+L+ + +E + G ++EL+ G +DKD H MP + + A + +L P Sbjct: 38 AEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDDIAERVD--PDDEELLKKVAETSMTGKSSELNKELLADLIVRAVRQVT-VEANDGSHVVDLENVSIETQTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNEP 248
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 9.124e-38 Identity = 92/212 (43.40%), Postives = 132/212 (62.26%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKM--VNRCKRRLAEIAVKAVLAVADLERKDVNLDL--IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 +L++SLGPKG+DKML D+TITNDGATI++ M+V + AKL++E +++ D E+GDGTT VVV+AG LLE+AE LL + IHP I EGY A ++E L+ IA K D + + TTL+SK ++ + ++A LAV D +LD+ IK+ GG +D+EL+ GI VDK+ ++ MPKR EN K+ + P Sbjct: 31 MLKSSLGPKGLDKMLVEGQ-DITITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALSSSLELLKSIADK--ISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIEASLAVLDKRDGTYDLDIKNIKIVKVNGGEFDDSELVNGIVVDKEPTNENMPKRAENVKVMLADFP 239
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.318e-36 Identity = 92/211 (43.60%), Postives = 136/211 (64.45%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVL-AVADLERKDVNLDL--IKVEGKVGGRLEDTELIYGITVDK-DMSHPQMPKRIENAKIAIL 635 A +RTSLGPKGMDKM+Q+ G V I+NDG TIL+ M V + AK++V+LS SQD GDGTT VV++AGSLL A+KLL++GIHP IAE ++ A++ A E + +++ + L+D E L++ T+LNSK+V++ LA + V A L A + LDL I++ +GG +EDT L G+ ++ + + P R+E AKI ++ Sbjct: 32 ADAIRTSLGPKGMDKMIQTARGQVIISNDGNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSIIAENFQKAAQRAAEVVMDMSKPID--LSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAALQAAKKTPEGGLTLDLNDIRIIKSLGGTIEDTTLANGLVLNNYAVKNAGGPSRMEKAKIGLI 240
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.721e-36 Identity = 86/212 (40.57%), Postives = 127/212 (59.91%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEF-GLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 I+RT+LGPK M KML P G + +TNDG IL ++DV + AK M+EL+R+QD E+GDGTT V+++AG +L E LER IHP I Y A V E + + NDL+ +V +C+ T K ++ + ++AVKAV +V E V +D+ KVE GG LE++ ++ G+ +KD++HP M + IEN ++ +L CP Sbjct: 36 IVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENENDLQKIVSSCIGT---KFSSKWGNLIVDLAVKAVKSVYKKEGDYVEIDVKRYAKVEKIPGGLLEESVVLDGVMFNKDVTHPGMRRYIENPRVVLLDCP 244
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.007e-36 Identity = 88/212 (41.51%), Postives = 135/212 (63.68%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPD----GDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 +++++LGPKGMDK+L S + G + +TNDGATIL+ + VDN AK++V++S +QD+E+GDGTT V V+A LL++AEKL+ + IHP I GY A IA E L++ E G N + L++ TTL SK++++ K A++AV AVL + + NLD I++ K+GG + ++ L G ++K + P+R+E AKI I P Sbjct: 33 LVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKK--SSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRL----KGSGNLDAIQIIKKLGGSMNESYLDEGFLLEK-LPGMFQPRRVEKAKILIANTP 237
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36 Identity = 86/211 (40.76%), Postives = 129/211 (61.14%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKD----VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A +R++LGPKGMDKML S GDVT+TNDG TIL++MD+DN A+++VE++ +Q+ E GDGTT V +AG LL+ AE LLER IHP I +GY +A+ A E ++ +A + +D + + T++ K K L+ I AV VA +E D V+ I +E + G + +++L+ G + KD H QMP +E+A + +L Sbjct: 39 ADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEVDNVA--VDVDPDDKDLIRSVAETSMTGKGAELDKELLSSIIYDAVNQVA-VETNDGGIVVDAANINIETQTGHGVNESQLLRGAAISKDPVHDQMPAAVEDADVLLL 246
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.540e-36 Identity = 81/214 (37.85%), Postives = 132/214 (61.68%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLN-DLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 A ++RT LGP+ M KML P G V +TNDG IL +++V + AK M+EL+R+QD E+GDGTT V+++AG +L A LL+R IHP+ + ++ A A+ ++ I N ++ L++TC+ T K+V R + +A++AV VA + +D+ +VE GG +E + ++ G+ ++KD++HP+M +RIEN +I +L CP Sbjct: 32 ADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGT---KLVARWSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCP 242
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.747e-34 Identity = 87/207 (42.03%), Postives = 131/207 (63.29%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDGDVT-ITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERG-IHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL-EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAI 632 +++++LGPKGMDK+LQS + +TNDGATIL+ + +DN AK++V +S+ QD E+GDGTT V V++ LL +AEKL+++ IHP I EGY +AS A++ L + A E L+ TTL+SK++++ K AE+A A+L + + NL+ I++ +GG+L D+ L G + K + Q PKRIENAKI I Sbjct: 32 LVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRL----KGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILI 233
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.120e-34 Identity = 89/209 (42.58%), Postives = 132/209 (63.16%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSP--DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL---EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAI 632 +++++LGPKGMDK+L S D + +TNDGATIL+ + VDN AK++V++SR QD E+GDGTT V V+A LL +AE L+ + IHP I G+ A++ A E L ++ + G +++ + L+ TTL+SK++ K ++AV+AVL + + NL+ I V K+GG L D+ L G +DK + Q PKRIENAKI I Sbjct: 38 LVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREAL--LSSAVDHGSDEVKFWQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRL----KGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQ-PKRIENAKILI 239
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 79/212 (37.26%), Postives = 132/212 (62.26%), Query Frame = 3 Query: 9 TRARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNL-DLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 T A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y MA + L++I+ + +N+ E ++ +++ +K+++R IA+ AV V E RK++++ +VE GG +ED+ ++ G+ ++KD++HP+M + I+N +I +L Sbjct: 32 TIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPVD--VNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLL 241 The following BLAST results are available for this feature:
BLAST of CX288192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288192 ID=CX288192; Name=CX288192; organism=Citrus clementina; type=EST; length=648bpback to top |