CX288192
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.386e-32 Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV------ADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A I+++SLGP+G+DKML GDVTITNDGATIL Q++V + AK++VELS+ QD E+GDGTT VV++A LL++A +L++ +HP I G+++A++ A + I + + +L E L+ T+++SK++ ++I V AV +V D + N+ +IK G+ ++LI G + QM RIE AKIA+L Sbjct: 29 ANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTY---IKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTNLMGDTKYPIKNVKIIKSHGQ---STLQSQLIRGYVLQTQRCDQQMKTRIEKAKIALL 237
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.386e-32 Identity = 78/212 (36.79%), Postives = 130/212 (61.32%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV---ADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A ++TSLGP G+DKML GDVTITNDGATIL+ +DV++ AK++V+L++ QD E+GDGTT VV++A +LL+ A++L+ R +HP + GY +A R A ++++ + + +N L L+ T ++SK++N +++AV A++AV + + + + G + ++ LI G ++ + QMP+ I+ AKIA L Sbjct: 26 ANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ---EHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIKAVNILKAHGRSMSESMLIDGYALNCTAASQQMPRIIKKAKIAFL 234
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 83/227 (36.56%), Postives = 131/227 (57.71%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND-LEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVA-------------DLERKDVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCP 644 A I+R++LGP+ M KML P G + ITNDG IL ++DV + AK M+ELSR+ D E+GDGTT V+++AG +L AE + IHP I GY A + A+ E A + ++ ++ LVQ+C + +K +R + ++A+KAVL V+ D+ + + +D+ KVE GG + D ++ G+ +KD++H +M +RIEN +I +L P Sbjct: 36 ADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSC---IGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTP 259
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 76/212 (35.85%), Postives = 129/212 (60.85%), Query Frame = 3 Query: 9 TRARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNL-DLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 T A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ ++ + ++ +++ +K+++R IA+ AV V E RK++++ +VE GG +ED+ ++ G+ ++KD++HP+M + I+N +I +L Sbjct: 32 TIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLL 241
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 79/214 (36.92%), Postives = 133/214 (62.15%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERK-DVN-----LDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A I++TS GP G+DKML G + +TNDGATIL+++D+++ AK++V+LS QD E+GDGTT VV++A LL++A +L+ R +HP I G+ +A A++++ E +A K E D +V T+++SK +N ++I ++A+ V ++ K DV ++++K GK +++ L+ G ++ ++ MPKRI+ AKIA L Sbjct: 30 ANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDF--IVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKGDVKYPINAINILKAHGK---SAKESTLVEGYALNCTVASEGMPKRIQGAKIAFL 238
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31 Identity = 79/211 (37.44%), Postives = 125/211 (59.24%), Query Frame = 3 Query: 24 LRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG----LNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSH---PQMPKRIENAKIAIL 635 +RT+LGP G DK++ G+V I+NDGATI++ +D+ + AK +V+++R+QD E+GDGTT VVV AG LL +A +E G+ I GY A+++AV ++ IA + L DL L + T +NSK++ ++ V AVL L+++D+N ++I ++ GG +ED+ L+ G+ K S+ Q PK +N KI L Sbjct: 40 IRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDL--LTKCASTAMNSKLIRSNSTFFTKMVVDAVLT---LDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCL 245
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31 Identity = 80/215 (37.21%), Postives = 132/215 (61.40%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLER----IAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNL---DLIKVEGKVGGRLEDTELIYGITVDKDMSH---PQMPKRIENAKIAIL 635 I++T+LGP+GMDK+++ G TI+NDGATIL +D+ + AK +V+++++QD E+GDGTT V ++AG LL++++ +E G+HP + +GY+ A ++A+ L+ +A K + E L++ T+LNSK++ K +E+ V+AV E D NL DLI ++ GG + D+ L+ G+ K S+ Q PK+ N KI +L Sbjct: 35 IVKTTLGPRGMDKLIEGNRG-ATISNDGATILNLLDIVHPAAKTLVDIAKAQDDEVGDGTTSVCLLAGELLKESKNFIEEGMHPQIVTKGYKEALKLALTFLQENSYSVADKSDG--EKREMLLKCAQTSLNSKLLAHYKEFFSEMVVQAV------ETLDTNLLDKDLIGIKMVTGGSVTDSVLVKGVAFKKTFSYAGFEQQPKKFANPKICLL 240
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31 Identity = 78/213 (36.62%), Postives = 126/213 (59.15%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVN------LDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 A ++++SLGP G+DKML GDVT+TNDGATIL +DV++ K++VEL++ QD E+GDGTT VV++A LL +A +L++ IHP I GY +A R AV+ + + L E L+ T+++SK++ + +AV A+L+V K ++++K GK ++ L+ G ++ ++ M R++NAKIA+L Sbjct: 34 ANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGK-ESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKSS---RESVLVKGYALNCTIASQAMKTRVQNAKIAVL 242
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.843e-31 Identity = 83/207 (40.10%), Postives = 125/207 (60.39%), Query Frame = 3 Query: 21 ILRTSLGPKGMDKMLQSPDG--DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG-LNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAI 632 +++T+LGPKGMDK+L S ++ ITNDGATIL ++ +DN AK++V++SR+QD E+GDGTT V V+AG LL + E+L+++ +HP I G+ +A A L+ Q + E L+ TTL+SK+++ K A + V AVL + + NLD I + K GG L ++ L G ++K + PKR+EN KI I Sbjct: 37 LVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFREDLLNIARTTLSSKILHTEKDHFANMVVDAVLRL----NGNTNLDNIHIIKKSGGSLRESYLDEGFILEKKIG-VGCPKRLENPKILI 238
BLAST of CX288192 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.843e-31 Identity = 81/214 (37.85%), Postives = 130/214 (60.75%), Query Frame = 3 Query: 15 ARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV------ADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAIL 635 + I++TSLGP G+DKML GDVTITNDGATIL ++V++ AK++VEL+ QD E+GDGTT VV++A LL++A L+ IHP I GY +A R + +++ E++ K E L + PL+ T+++SK+++ A + V+AVL+V +++ ++++K G+ D+ L+ G ++ + MP R+ AKIA L Sbjct: 32 SNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVE-KLGKV-PLINCAKTSMSSKLISGDSDFFANLVVEAVLSVKMTNQRGEIKYPIKGINILKAHGQ---SARDSYLLNGYALNTGRAAQGMPLRVSPAKIACL 240 The following BLAST results are available for this feature:
BLAST of CX288192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 383
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288192 ID=CX288192; Name=CX288192; organism=Citrus clementina; type=EST; length=648bpback to top |