CX288197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_NICTO (50S ribosomal protein L2, chloroplastic OS=Nicotiana tomentosiformis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_NICSY (50S ribosomal protein L2, chloroplastic OS=Nicotiana sylvestris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_DAUCA (50S ribosomal protein L2, chloroplastic OS=Daucus carota GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2B_COFAR (50S ribosomal protein L2-B, chloroplastic OS=Coffea arabica GN=rpl2-B PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 238 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 276
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2B_ATRBE (50S ribosomal protein L2-B, chloroplastic OS=Atropa belladonna GN=rpl2-B PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2A_COFAR (50S ribosomal protein L2-A, chloroplastic OS=Coffea arabica GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2A_ATRBE (50S ribosomal protein L2-A, chloroplastic OS=Atropa belladonna GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.224e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+P TPWGYPALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15 Identity = 36/39 (92.31%), Postives = 39/39 (100.00%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWG+PALGRRSRKRNKYSDNLILRRR+K Sbjct: 236 RAPIGRKKPATPWGHPALGRRSRKRNKYSDNLILRRRSK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_PHAVU (50S ribosomal protein L2, chloroplastic OS=Phaseolus vulgaris GN=rpl2-A PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.794e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWG+PALGRRSRKR KYSDNLILRRRTK Sbjct: 236 RAPIGRKKPATPWGFPALGRRSRKRKKYSDNLILRRRTK 274
BLAST of CX288197 vs. ExPASy Swiss-Prot
Match: RK2_PHAAN (50S ribosomal protein L2, chloroplastic OS=Phaseolus angularis GN=rpl2 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.794e-15 Identity = 36/39 (92.31%), Postives = 38/39 (97.44%), Query Frame = 2 Query: 2 RAPIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 118 RAPIGRK+PATPWG+PALGRRSRKR KYSDNLILRRRTK Sbjct: 237 RAPIGRKKPATPWGFPALGRRSRKRKKYSDNLILRRRTK 275 The following BLAST results are available for this feature:
BLAST of CX288197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288197 ID=CX288197; Name=CX288197; organism=Citrus clementina; type=EST; length=178bpback to top |