CX288203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_STAA8 (Elongation factor Tu OS=Staphylococcus aureus (strain NCTC 8325) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 279 LRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_STAA3 (Elongation factor Tu OS=Staphylococcus aureus (strain USA300) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 279 LRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_STAA2 (Elongation factor Tu OS=Staphylococcus aureus (strain JH1) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 279 LRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_STAA1 (Elongation factor Tu OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 75/121 (61.98%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R + D+QRG VLA PG+ITPHT+F A VYVL K+EGGRH+PFF+ YRPQFY RTTDVTG V E ++MVMPGD V+M VELI P+A E G RF+IREGG+TVG+GV+ II+ Sbjct: 279 LRGVAREDVQRGQVLAAPGSITPHTEFKAEVYVLSKDEGGRHTPFFSNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNVEMTVELIAPIAIEDGTRFSIREGGRTVGSGVVTEIIK 394
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SILST (Elongation factor Tu OS=Silicibacter sp. (strain TM1040) GN=tuf1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 73/120 (60.83%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ ++RG VL KPG++TPHTKF A Y+L KEEGGRH+PFFA YRPQFY RTTDVTG V+ E ++MVMPGD +K VELI P+A E G+RFAIREGG+TVGAGV+ I+ Sbjct: 276 LRGIDREAVERGQVLCKPGSVTPHTKFEAEAYILTKEEGGRHTPFFANYRPQFYFRTTDVTGTVT-----LPEGTEMVMPGDNLKFEVELIAPIAMEDGLRFAIREGGRTVGAGVVSKIL 390
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SHESH (Elongation factor Tu OS=Shewanella sediminis (strain HAW-EB3) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLA PG+ITPHT F + +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD V M V LI P+A ++G+RFAIREGG+TVGAGV+ I+ Sbjct: 279 LRGTKREDVERGQVLAAPGSITPHTTFKSEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNVAMTVTLICPIAMDEGLRFAIREGGRTVGAGVVAEIV 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SACD2 (Elongation factor Tu OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=tuf1 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VL+KPG++TPHT F + +YVL K+EGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD V+M V LI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 292 LRGTKRDDVERGQVLSKPGSVTPHTTFQSEIYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGAC-----ELPEGVEMVMPGDNVQMTVTLIAPIAMEEGLRFAIREGGRTVGAGVVAKII 406
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_PSESM (Elongation factor Tu OS=Pseudomonas syringae pv. tomato GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VL KPGT+ PHT+F A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD VK+ V LI P+A E G+RFAIREGG+TVGAGV+ II Sbjct: 282 LRGTKRDDVERGQVLVKPGTVKPHTQFEAEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKVSVTLIKPIAMEDGLRFAIREGGRTVGAGVVAKII 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_PSE14 (Elongation factor Tu OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 74/120 (61.67%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VL KPGT+ PHT+F A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD VK+ V LI P+A E G+RFAIREGG+TVGAGV+ II Sbjct: 282 LRGTKRDDVERGQVLVKPGTVKPHTQFEAEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKVSVTLIKPIAMEDGLRFAIREGGRTVGAGVVAKII 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.370e-36 Identity = 73/119 (61.34%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R ++ D++RGMV+AKPGT TPHT F A VY+L KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +M VELI P+A ++G+RFAIREGG+TVGAG + I Sbjct: 282 LRGTKREDVERGMVVAKPGTTTPHTNFEASVYILSKEEGGRHTPFFNNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNTEMAVELIQPIAMDEGLRFAIREGGRTVGAGRVTKI 395 The following BLAST results are available for this feature:
BLAST of CX288203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288203 ID=CX288203; Name=CX288203; organism=Citrus clementina; type=EST; length=514bpback to top |