CX288203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU1_RHOPS (Elongation factor Tu 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=tuf1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.336e-36 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ D++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 281 LRGTKREDVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_THIDA (Elongation factor Tu OS=Thiobacillus denitrificans (strain ATCC 25259) GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 72/121 (59.50%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ ++QRG VLAKPG+I PHTKF A +YVL K+EGGRH+PFF GYRPQFY RTTDVTG + + ++MVMPGD V + V LI P+A ++G+RFAIREGG+TVGAGV+ I E Sbjct: 281 LRGTKREEVQRGQVLAKPGSIKPHTKFSAEIYVLSKDEGGRHTPFFNGYRPQFYFRTTDVTGSI-----ELPAGTEMVMPGDNVSIKVSLIQPIAMDEGLRFAIREGGRTVGAGVVAKIEE 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_THICU (Elongation factor Tu OS=Thiobacillus cuprinus GN=tuf PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 71/121 (58.68%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ +++RG VL KPG+I PHT F A VYVL K+EGGRH+PFF YRPQFY RTTDVTG + + ++ +MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+ IIE Sbjct: 281 LRGTKREEVERGQVLCKPGSIKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPKDKEMVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIIE 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SHESA (Elongation factor Tu OS=Shewanella sp. (strain ANA-3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 279 LRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 279 LRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 279 LRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEON (Elongation factor Tu 1 OS=Shewanella oneidensis GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 72/119 (60.50%), Postives = 91/119 (76.47%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R ++ D++RG VL+KPG+I PHT F + VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD +KM V LI P+A ++G+RFAIREGG+TVGAGV+ I Sbjct: 279 LRGTKRDDVERGQVLSKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIKMKVTLICPIAMDEGLRFAIREGGRTVGAGVVAKI 392
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_PSEU2 (Elongation factor Tu OS=Pseudomonas syringae pv. syringae (strain B728a) GN=tuf PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36 Identity = 73/120 (60.83%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VL KPG++ PHT+F A +YVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD VK+ V LI P+A E G+RFAIREGG+TVGAGV+ II Sbjct: 282 LRGTKRDDVERGQVLVKPGSVKPHTQFEAEIYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSC-----ELPEGVEMVMPGDNVKVSVTLIKPIAMEDGLRFAIREGGRTVGAGVVAKII 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36 Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D+QRG VL KPG+I PHT F +YVL K+EGGRH+PFF YRPQFY RTTDVTG + + E +MVMPGD V + V+LI P+A E+G+RFAIREGGKTVGAGV+ II Sbjct: 281 LRGTKREDVQRGQVLCKPGSIKPHTHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAI-----ELPEGKEMVMPGDNVSITVKLINPIAMEEGLRFAIREGGKTVGAGVVAKII 395
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_LISW6 (Elongation factor Tu OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=tuf PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.985e-36 Identity = 74/119 (62.18%), Postives = 90/119 (75.63%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 360 +R + DIQRG VLAKPG+ITPHT F A YVL KEEGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD +++ VELI P+A E G +F+IREGG+TVGAGV+ +I Sbjct: 280 LRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSNI 393 The following BLAST results are available for this feature:
BLAST of CX288203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288203 ID=CX288203; Name=CX288203; organism=Citrus clementina; type=EST; length=514bpback to top |