CX288203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_RHOP5 (Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisA53) GN=tuf1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ +++RG VL KPG++ PHTKF A Y+L KEEGGRH+PFF YRPQFY RTTDVTG V E ++MVMPGD + M V LI+P+A E+ +RFAIREGG+TVGAGV+ SIIE Sbjct: 281 LRGTKREEVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVV-----HLPEGTEMVMPGDNIAMEVHLIVPIAMEEKLRFAIREGGRTVGAGVVASIIE 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_RALEH (Elongation factor Tu OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=tuf1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ D++RG VL KPG+I PHT F VY+L K+EGGRH+PFF YRPQFY RTTDVTG SI KD+E MVMPGD V + V+LI P+A E+G+RFAIREGG+TVGAGV+ I++ Sbjct: 281 LRGTKREDVERGQVLCKPGSIKPHTHFTGEVYILSKDEGGRHTPFFNNYRPQFYFRTTDVTG---SIELPKDKE--MVMPGDNVSITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKILD 396
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_OCHA4 (Elongation factor Tu OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=tuf1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 IR + D++RG VL KPG++ PHTKF A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD V M V LI+P+A E+ +RFAIREGG+TVGAG++ SIIE Sbjct: 276 IRGVGREDVERGQVLCKPGSVKPHTKFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGVVT-----LPEGTEMVMPGDNVAMDVTLIVPIAMEEKLRFAIREGGRTVGAGIVSSIIE 391
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBL (Elongation factor Tu OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=tuf1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DI+RG VLAKPG+ITPH KF A VYVL K+EGGRH+PF YRPQFY RTTDVTG V ++ N + MVMPGD V + VELI P+A ++G++FAIREGG+T+G+GV+ IIE Sbjct: 286 LRGTKKEDIERGQVLAKPGSITPHKKFAAEVYVLTKDEGGRHTPFINNYRPQFYFRTTDVTG-VCNLPNGVE----MVMPGDNVSLTVELISPIAMDKGLKFAIREGGRTIGSGVVVDIIE 401
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBJ (Elongation factor Tu OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=tuf PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 74/121 (61.16%), Postives = 93/121 (76.86%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DI+RG VLAKPG+ITPH KF A VYVL K+EGGRH+PF YRPQFY RTTDVTG V ++ N + MVMPGD V + VELI P+A ++G++FAIREGG+T+G+GV+ IIE Sbjct: 286 LRGTKKEDIERGQVLAKPGSITPHKKFAAEVYVLTKDEGGRHTPFINNYRPQFYFRTTDVTG-VCNLPNGVE----MVMPGDNVSLTVELISPIAMDKGLKFAIREGGRTIGSGVVVDIIE 401
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ D++RG VLA P +ITPH KF A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++ +E +MVMPGD VELI P+A E G+RFAIREGG+TVGAGV+ I+E Sbjct: 282 LRGVKRDDVERGQVLAAPKSITPHRKFKAEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGVIT-----LEEGVEMVMPGDNATFNVELIAPIAMELGLRFAIREGGRTVGAGVVSEIVE 397
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 73/121 (60.33%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ D++RG VLA P +ITPH KF A VYVL KEEGGRH+PFF+GYRPQFY RTTD+TG ++ +E +MVMPGD VELI P+A E G+RFAIREGG+TVGAGV+ I+E Sbjct: 282 LRGVKRDDVERGQVLAAPKSITPHRKFKAEVYVLSKEEGGRHTPFFSGYRPQFYFRTTDITGVIT-----LEEGVEMVMPGDNATFNVELIAPIAMELGLRFAIREGGRTVGAGVVSEIVE 397
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_BLOFL (Elongation factor Tu OS=Blochmannia floridanus GN=tuf PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 69/120 (57.50%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ +++RG VL+KPG I PH+ F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + +E +MVMPGD +KMVV LI P+A + G+RFAIREGG+TVGAGV+ +I Sbjct: 279 LRGTKRDEVERGQVLSKPGCIKPHSNFESEVYILNKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPKEVEMVMPGDNIKMVVHLISPIAMDDGLRFAIREGGRTVGAGVVSRVI 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_BART1 (Elongation factor Tu OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=tuf1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 72/121 (59.50%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ I+RG VLAKPG++TPHT+F A Y+L K+EGGRH+PFF YRPQFY RTTDVTG V+ E ++MVMPGD V M V LI+P+A E+ +RFAIREGG+TVGAG++ IIE Sbjct: 276 LRGVDREGIERGQVLAKPGSVTPHTRFKAEAYILTKDEGGRHTPFFTNYRPQFYFRTTDVTGIVT-----LPEGTEMVMPGDNVAMDVSLIVPIAMEEKLRFAIREGGRTVGAGIVSKIIE 391
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU2_PHOLL (Elongation factor Tu 2 OS=Photorhabdus luminescens subsp. laumondii GN=tuf2 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 6.798e-36 Identity = 71/120 (59.17%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ +I+RG VLAKPG+I PHT F + VY+L K+EGGRH+PFF GYRPQFY RTTDVTG + + E +MVMPGD ++M V LI P+A +QG+RFAIREGG+TVGAGV+ +I Sbjct: 279 LRGTKRDEIERGQVLAKPGSIKPHTTFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-----ELPEGVEMVMPGDNIQMKVTLIAPIAMDQGLRFAIREGGRTVGAGVVAKVI 393 The following BLAST results are available for this feature:
BLAST of CX288203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288203 ID=CX288203; Name=CX288203; organism=Citrus clementina; type=EST; length=514bpback to top |