CX288203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.564e-40 Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R + DI+ GMVL++PGTITPHT F + VYVL K+EGGRH+PFF GYRPQFY+RTTDVTG ++ D +MVMPGDR+KM ELI PVA E+GMRFAIREGG+T+GAGV+ II+ Sbjct: 289 LRGVTREDIEAGMVLSEPGTITPHTNFESEVYVLTKDEGGRHTPFFTGYRPQFYVRTTDVTGAITQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKIIQ 409
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.483e-40 Identity = 79/130 (60.77%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K D++RGMVLAKPG+ITPHTKF A VYVL KEEGGRHSPF GY+PQF++RTTDVTG++ S + ++ +KM MPGDR+++ V+LI PVA E+GMRFAIREGG+TVGAGV+ +I+E Sbjct: 289 LRGIQKKDVERGMVLAKPGSITPHTKFEAQVYVLTKEEGGRHSPFLVGYQPQFFIRTTDVTGKIVSFTHIQMKNPSSVAEEHSNKMAMPGDRIEVTVQLIYPVAVEKGMRFAIREGGRTVGAGVVTNILE 418
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMF (Elongation factor Tu OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=tuf1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 279 LRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMB (Elongation factor Tu OS=Neisseria meningitidis serogroup B GN=tufA PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 279 LRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_NEIMA (Elongation factor Tu OS=Neisseria meningitidis serogroup A GN=tufA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ +E +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 279 LRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEEGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_CHLRE (Elongation factor Tu, chloroplastic OS=Chlamydomonas reinhardtii GN=tufA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 80/130 (61.54%), Postives = 99/130 (76.15%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMN---------DKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R +K DI+RGMV+AKPGTITPHTKF A VYVL KEEGGRHS F GY+PQFY+RTTDVTG+V + ++ +KM MPGDR+ M VELI P+A E+GMRFAIREGG+TVGAGV+ +I++ Sbjct: 289 LRGVQKKDIERGMVIAKPGTITPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFYVRTTDVTGKVVGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPIAIEKGMRFAIREGGRTVGAGVVTNIVQ 418
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.324e-39 Identity = 81/120 (67.50%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R EK +I+RG VLAKPG+ITPHTKF VYVLKKEEGGRH+PFF YRPQFY+RTTDVTG V + E KMVMPGD + M +ELI PVA E+ MRFAIREGGKTVGAGV+ I+ Sbjct: 281 LRGVEKEEIERGQVLAKPGSITPHTKFTGEVYVLKKEEGGRHTPFFTNYRPQFYIRTTDVTGTV-----NLPEGVKMVMPGDNITMTIELIAPVALEEQMRFAIREGGKTVGAGVVTKIL 395
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_NEIG1 (Elongation factor Tu OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tuf1 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.258e-39 Identity = 78/120 (65.00%), Postives = 96/120 (80.00%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLAKPGTITPHTKF A VYVL KEEGGRH+PFFA YRPQFY RTTDVTG V+ ++ +MVMPG+ V + VELI P+A E+G+RFAIREGG+TVGAGV+ S+I Sbjct: 279 LRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVT-----LEKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVI 393
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_CHRVO (Elongation factor Tu OS=Chromobacterium violaceum GN=tuf1 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.258e-39 Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 363 +R ++ D++RG VLAKPGTITPHTKF A VYVL K+EGGRH+PFFA YRPQFY RTTDVTG +S E +MVMPGD V++ VELI P+A E+G+RFAIREGG+TVGAGV+ II Sbjct: 281 LRGTKREDVERGQVLAKPGTITPHTKFEASVYVLSKDEGGRHTPFFANYRPQFYFRTTDVTGAISLA-----EGVEMVMPGDNVEIKVELIAPIAMEEGLRFAIREGGRTVGAGVVAKII 395
BLAST of CX288203 vs. ExPASy Swiss-Prot
Match: EFTU_PSEAE (Elongation factor Tu OS=Pseudomonas aeruginosa GN=tufA PE=3 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 3.851e-39 Identity = 79/121 (65.29%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 4 IRHEEKADIQRGMVLAKPGTITPHTKFLAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGRVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 366 +R ++ D++RG VLAKPGTI PHTKF VYVL KEEGGRH+PFF GYRPQFY RTTDVTG + E +MVMPGD +KMVV LI P+A E G+RFAIREGG+TVGAGV+ IIE Sbjct: 282 LRGTKREDVERGQVLAKPGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNC-----ELPEGVEMVMPGDNIKMVVTLIAPIAMEDGLRFAIREGGRTVGAGVVAKIIE 397 The following BLAST results are available for this feature:
BLAST of CX288203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288203 ID=CX288203; Name=CX288203; organism=Citrus clementina; type=EST; length=514bpback to top |