CX288223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A1_DEBHA (Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.173e-11 Identity = 36/48 (75.00%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK KGK ASQE Sbjct: 87 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSAKGK-----ASQE 129
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.173e-11 Identity = 32/38 (84.21%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG 150 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GKG Sbjct: 87 AIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG 124
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_NEUCR (Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 3.413e-11 Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK GK +ASQE Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTGK----NASQE 133
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_ASPTN (Histone H2A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=hta1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.413e-11 Identity = 32/40 (80.00%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKG 156 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K KG Sbjct: 88 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAKG 127
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A3_ARATH (Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.413e-11 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 153 AVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 88 AVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGSSK 126
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.413e-11 Identity = 35/48 (72.92%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK ASQE Sbjct: 87 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSGKS----AKASQE 130
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3) HSP 1 Score: 66.6254 bits (161), Expect = 4.458e-11 Identity = 35/48 (72.92%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK G G +ASQE Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGTKPGK--NASQE 134
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.458e-11 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 153 AVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 88 AVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKAGASK 126
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.458e-11 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 153 AVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 88 AVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.458e-11 Identity = 32/39 (82.05%), Postives = 33/39 (84.62%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGK 153 AVRNDEELSKLLG VTIANGGV+PNIH LLPKK G K Sbjct: 88 AVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKTGASK 126 The following BLAST results are available for this feature:
BLAST of CX288223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288223 ID=CX288223; Name=CX288223; organism=Citrus clementina; type=EST; length=377bpback to top |