CX288223
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK K K ASQE Sbjct: 87 AIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK-----ASQE 129
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_GIBZE (Histone H2A OS=Gibberella zeae GN=HTA1 PE=3 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK 147 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGK 125
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_CHAGB (Histone H2A OS=Chaetomium globosum GN=HTA1 PE=3 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK 147 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGK 125
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.604e-11 Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K K G+ASQE Sbjct: 87 AIRNDEELNKLLGDVTIAQGGVLPNIHQSLLPAKKAKA----GAASQE 130
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_YARLI (Histone H2A OS=Yarrowia lipolytica GN=HTA1 PE=3 SV=3) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKG-KGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLP+K KG KG ASQE Sbjct: 90 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPRKSAKGAKG----ASQE 134
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGK-GKG 156 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K GKG Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKPGKG 129
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_CHLRE (Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 159 A+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GKG+ Sbjct: 86 AIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGGKGE 126
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A_BOTFB (Histone H2A OS=Botryotinia fuckeliana (strain B05.10) GN=hta1 PE=3 SV=4) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 35/48 (72.92%), Postives = 37/48 (77.08%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180 A+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK K G ASQE Sbjct: 89 AIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTAKTAGG-KPASQE 135
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A4_VOLCA (Histone H2A-IV OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 159 A+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GKG+ Sbjct: 86 AIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGKGE 126
BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A3_VOLCA (Histone H2A-III OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 1 Query: 37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGD 159 A+RNDEEL KLLG VTIA+GGVLPNIH LLPKK GKG+ Sbjct: 86 AIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGKGE 126 The following BLAST results are available for this feature:
BLAST of CX288223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288223 ID=CX288223; Name=CX288223; organism=Citrus clementina; type=EST; length=377bpback to top |