CX288223

Overview
NameCX288223
Unique NameCX288223
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length377
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX288223 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11
Identity = 34/48 (70.83%), Postives = 38/48 (79.17%), Query Frame = 1 
Query:   37 AVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKMGKGKGDIGSASQE 180
            A+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K  K     G+ASQE
Sbjct:   87 AIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAKKAKA----GNASQE 130
The following BLAST results are available for this feature:
BLAST of CX288223 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
H2A2_DEBHA9.931e-1170.83Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC01018B01SK Veg1 Citrus clementina cDNA clone C01018B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288223 ID=CX288223; Name=CX288223; organism=Citrus clementina; type=EST; length=377bp
AATCGGCACGAGGCCTCGTGCCGAATCGGCACGAGGGCAGTTCGAAATGA
TGAGGAATTGAGCAAGCTGCTGGGCTCGGTTACCATTGCCAATGGAGGTG
TTTTACCCAACATTCACCAGACGCTGCTTCCCAAGAAGATGGGGAAAGGA
AAGGGTGACATTGGTTCTGCTTCTCAAGAGTTCTAGACTCTGCTCTGTCA
GAATTTTACTAGTATCTGTAAAAAAGGACAAAAAGAAAAATGGTTATGAG
TTTTTTTCTTATGGTAACAGAGATTGCATTTGCTAATCTTTAACTATGTG
TAACTTGATGAGATTATTCCATTGCTTTCCACATGTTATTTGTTATTGAA
CAATAAAAAAAAAAAAAAAAAAAAAAA
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