CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_METPB (Alanyl-tRNA synthetase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=alaS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 HV QKGS+V PE+LRFD SH KP+D L R+E I N + V +K + EA +G RA+FGE Y D VRVV++GR V+D Sbjct: 581 HVAQKGSLVAPERLRFDISHPKPIDEAELTRVEEIANAVLLQNAPVVTKLMAVDEAIE-SGARALFGEKYGDEVRVVSMGRPVDD 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_METEP (Alanyl-tRNA synthetase OS=Methylobacterium extorquens (strain PA1) GN=alaS PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 HV QKGS+V PE+LRFD SH KP+D L R+E I N + V +K + EA +G RA+FGE Y D VRVV++GR V+D Sbjct: 581 HVAQKGSLVAPERLRFDISHPKPIDEAELSRVEEIANAVLLQNAPVVTKLMAVDEAIE-SGARALFGEKYGDEVRVVSMGRPVDD 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_HAHCH (Alanyl-tRNA synthetase OS=Hahella chejuensis (strain KCTC 2396) GN=alaS PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDF+H +P+ E +R++ESIVN QI+A V S E +A R G A+FGE Y D VRV+A+G Sbjct: 579 HVAQKGSLVDPERLRFDFAHFEPMTQEQIRQVESIVNAQIRANTSV-STEVMGMDAARERGAMALFGEKYGDTVRVLAMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_RHOP2 (Alanyl-tRNA synthetase OS=Rhodopseudomonas palustris (strain HaA2) GN=alaS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 H+ QKGS+V P++LRFDF H KP+ P+ LRR+E I N+ I E D + + R G RA+FGE Y D VRVV++G+ D Sbjct: 581 HIAQKGSMVAPDRLRFDFVHQKPITPDELRRVEDIAND-IVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGKTARD 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_GEOSL (Alanyl-tRNA synthetase OS=Geobacter sulfurreducens GN=alaS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q GS+V P++LRFDF+H + PE +RR+E IVN I A DV ++E L EA I G A+FGE Y D VRVV +G Sbjct: 584 HVKQSGSLVGPDRLRFDFTHFAAMTPEEIRRVEEIVNSCIMANDDVHAREMALDEAMEI-GATALFGEKYGDTVRVVRVG 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LISW6 (Alanyl-tRNA synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=alaS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 HV+Q GS+V P++LRFDFSH + E L ++E IVNE+I +++V +E +AEAK + G A+FGE Y D VRVV +G+ Sbjct: 583 HVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKIWEQINVVIEEMPIAEAKEL-GAMALFGEKYGDVVRVVQVGK 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LISMF (Alanyl-tRNA synthetase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=alaS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 HV+Q GS+V P++LRFDFSH + E L ++E IVNE+I +++V +E +AEAK + G A+FGE Y D VRVV +G+ Sbjct: 583 HVNQAGSLVSPDRLRFDFSHFGQITEEELTKLEEIVNEKIWEQINVVIEEMPIAEAKEL-GAMALFGEKYGDIVRVVQVGK 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_DEHSC (Alanyl-tRNA synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=alaS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 6 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 V Q+GSVV P++LRFDFSH KP+ + +RR+E VN++I+ L V+++E A G+ A+FGE Y D VRV+ +GR Sbjct: 579 VQQRGSVVTPDRLRFDFSHLKPMSKDEMRRVEEFVNDKIRRNLPVYAEEMPYRHALE-EGVTALFGEKYGDRVRVLRVGR 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_DEHSB (Alanyl-tRNA synthetase OS=Dehalococcoides sp. (strain BAV1) GN=alaS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 6 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 V Q+GSVV P++LRFDFSH KP+ + +RR+E VN++I+ L V+++E A G+ A+FGE Y D VRV+ +GR Sbjct: 579 VQQRGSVVTPDRLRFDFSHLKPMSKDEMRRVEEFVNDKIRRNLPVYAEEMPYRHALE-EGVTALFGEKYGDRVRVLRVGR 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BRASB (Alanyl-tRNA synthetase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=alaS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 39/101 (38.61%), Postives = 61/101 (60.40%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 305 H+ Q+GS+V P++LRFDF+H KP+ E L R+E I N+ + +V ++ L +A+ G RA+FGE Y D VRVV++G D ++ + + S E Sbjct: 581 HIAQRGSLVSPDRLRFDFAHPKPISAEELARVEDIANDVVLENAEVTTRLMALDDAREA-GARALFGEKYGDEVRVVSMGNAARDQASNAQASNAMGWSVE 680 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |