CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_THELT (Alanyl-tRNA synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDL 260 HV Q GS+V PEKLRFDF+H KP+ L IE++VNE I + V ++E + EA G A+FGE Y D VRVV + E+L Sbjct: 567 HVKQAGSLVTPEKLRFDFTHHKPLTDNELMSIENMVNEIILRSIPVITEEKSYKEAV-AEGAIALFGEKYGDVVRVVKVHSFSEEL 651
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEPK (Alanyl-tRNA synthetase OS=Pseudomonas putida (strain KT2440) GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + V PE ++++E IVN +I+ V E T E + G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKNTPV-ETELTDIETAKAKGAMALFGEKYGDTVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEP1 (Alanyl-tRNA synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=alaS PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + V PE ++++E IVN +I+ V E T E + G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKNTPV-ETELTDIETAKAKGAMALFGEKYGDTVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEE4 (Alanyl-tRNA synthetase OS=Pseudomonas entomophila (strain L48) GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + V PE ++ +E IVN +++ +V E T E + G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAVKPEQIKALEDIVNREVRRNTEV-QTELTDIETAKAKGAMALFGEKYGDTVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEGPA (Alanyl-tRNA synthetase OS=Legionella pneumophila (strain Paris) GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 35/80 (43.75%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q+GS+V E+ RFDFSH + ++P+ +++IE +VN QI+A +V ++ + AK+ +G A+FGE Y D VRV+++G Sbjct: 570 HVQQRGSLVDAERARFDFSHFEALNPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQ-SGAVALFGEKYSDAVRVLSMG 648
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_GEOUR (Alanyl-tRNA synthetase OS=Geobacter uraniireducens (strain Rf4) GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDL 260 HV Q GS+V E+LRFDF+H + E LRR+E+IVN + DV S E EA + +G A+FGE Y D VRVV +G +L Sbjct: 585 HVKQAGSLVTAERLRFDFTHFSAMTVEELRRVENIVNTYVMDNADVKSLEMAATEAMQ-SGATALFGEKYGDRVRVVKVGEVSSEL 669
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_ERWCT (Alanyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V LRFDFSH + + PE +R++E IVN QI+ L V + L +A R G A+FGE Y D VRV+++G Sbjct: 581 HVAQKGSLVNDSYLRFDFSHTEAMKPEQIRQVEDIVNAQIRRNLTVQTDVMALDDA-RAKGAMALFGEKYDDHVRVLSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_CAUCR (Alanyl-tRNA synthetase OS=Caulobacter crescentus GN=alaS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 HV QKG +V E++RFDFSHG P+ E L RIE+ VNE I+ + +KE EA G A+FGE Y D VRV+ +G+ + D Sbjct: 580 HVAQKGQMVDGERMRFDFSHGGPLTAEELDRIEAEVNEVIRQNVPAETKEMAPQEAIEA-GAVALFGEKYGDSVRVLTLGKSLAD 663
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SYMTH (Alanyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=alaS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q GS+V P++LRFDF+H P+ PE + +E ++N +I+A V E L EA+ + G A+FGE Y + VRVV++G Sbjct: 588 HVQQAGSLVAPDRLRFDFTHTGPMTPEQIAAVEEMINAEIEAAEPVTWTEMPLDEARAL-GAMALFGEKYGEIVRVVSVG 666
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHESH (Alanyl-tRNA synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=alaS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V E+LRFDFSH + V PE L+ +E +VN QI+ + ++ + +AK G A+FGE Y D VRVV +G Sbjct: 579 HVTQKGSLVDSERLRFDFSHFEGVKPEELKAVEDLVNTQIRRNHKLSAEVMDMDQAKE-KGAMALFGEKYTDEVRVVTMG 657 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |