CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSEPF (Alanyl-tRNA synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + + PE ++ +E IVN +I+ V ++E + AK+ G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEIRKNSAVETEETDIETAKQ-KGAMALFGEKYGDNVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_OCHA4 (Alanyl-tRNA synthetase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V P++LRFDFSH KP+ E L ++E++ NE I V ++ + +A G A+FGE Y D VRVV++G Sbjct: 581 HVAQKGSLVAPDRLRFDFSHPKPISAEELTQVENLANEIILQNAPVSTRLMAVDDA-IAEGAMALFGEKYGDEVRVVSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEGPH (Alanyl-tRNA synthetase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q+GS+V E+ RFDFSH + + P+ +++IE +VN QI+A +V ++ + AK+ +G A+FGE Y D VRV+++G Sbjct: 570 HVQQRGSLVDAERARFDFSHFEALTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQ-SGAVALFGEKYSDAVRVLSMG 648
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEGPC (Alanyl-tRNA synthetase OS=Legionella pneumophila (strain Corby) GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 35/80 (43.75%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV Q+GS+V E+ RFDFSH + + P+ +++IE +VN QI+A +V ++ + AK+ +G A+FGE Y D VRV+++G Sbjct: 570 HVQQRGSLVDAERARFDFSHFEALTPQQIQQIEEVVNAQIRANNEVITQVMDIESAKQ-SGAVALFGEKYSDAVRVLSMG 648
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_IDILO (Alanyl-tRNA synthetase OS=Idiomarina loihiensis GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V +K+RFDFSH +PV E L ++E VN Q++A L + ++ + EAK G A+FGE Y + VRVV +G Sbjct: 571 HVTQKGSLVEADKMRFDFSHFEPVTTEQLAQLEREVNAQVRANLPLQTQLMAIDEAKEA-GAMALFGEKYDEQVRVVRMG 649
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_FRAP2 (Alanyl-tRNA synthetase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=alaS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 H +QKGS+V KLRFDF+H K + + +IE++VN+QI+A V + E + +AK + G A+FGE Y D VRV+++G Sbjct: 571 HAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIETLVNQQIRANYPVATIETSQEKAKSL-GAEALFGEKYGDIVRVISMG 649
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_YERE8 (Alanyl-tRNA synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=alaS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V + LRFDFSH + + PE +R +E +VNEQI+ + V ++ L AK G A+FGE Y D VRV+ +G Sbjct: 581 HVAQKGSLVNDKYLRFDFSHFEAMKPEQIRLVEDMVNEQIRRNMPVQTEVMELDAAKE-KGAMALFGEKYDDQVRVLTMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHIFL (Alanyl-tRNA synthetase OS=Shigella flexneri GN=alaS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L + + L EA + G A+FGE Y + VRV+++G Sbjct: 581 HVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIETNIMNL-EAAKAKGAMALFGEKYDERVRVLSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHIF8 (Alanyl-tRNA synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=alaS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V + LRFDFSH + + PE +R +E +VN QI+ L + + L EA + G A+FGE Y + VRV+++G Sbjct: 581 HVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIETNIMNL-EAAKAKGAMALFGEKYDERVRVLSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SHEWM (Alanyl-tRNA synthetase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=alaS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 38/80 (47.50%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V E+LRFDFSH + V PE L+ +E +VN QI+ + + + +AK G A+FGE Y D VRVV +G Sbjct: 579 HVTQKGSLVDAERLRFDFSHFEGVKPEELKAVEDLVNTQIRRNHKLSADVMDMDQAKE-RGAMALFGEKYTDEVRVVTMG 657 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |