CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_METRJ (Alanyl-tRNA synthetase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=alaS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 287 HV QKGS+V PE+LRFD SH KP++ + L R+E I N + V +K + +A +G RA+FGE Y D VRVV++G V+ A P + + Sbjct: 581 HVAQKGSLVSPERLRFDISHPKPIEADELARVEDIANAVLLQNAPVVTKLMAVDDA-IASGARALFGEKYGDEVRVVSMGLPVDGEAAQPRARNF 674
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BEII9 (Alanyl-tRNA synthetase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=alaS PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 H+ QKGS+V P++LRFDFSH KPV PE +IE I N I V +K ++ +A +G RA+FGE Y D VRVV++G Sbjct: 581 HIAQKGSLVAPDRLRFDFSHPKPVTPEEWTQIEDIANSVILENAPVTTKLMSIEDAMG-SGARALFGEKYGDEVRVVSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_THICR (Alanyl-tRNA synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=alaS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 40/80 (50.00%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH +P+ E L IE +VN I V +E + EA + G A+FGE Y D VRVV +G Sbjct: 570 HVGQKGSLVQPERLRFDFSHFEPISAEQLLEIEQLVNHNIMLNAQVMMEEMDI-EAAKAKGAMALFGEKYGDVVRVVDMG 648
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_RHOPA (Alanyl-tRNA synthetase OS=Rhodopseudomonas palustris GN=alaS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 H+ QKGS+V P++LRFDF H KP+ + LR++E I N+ + +V ++ + +A+ G RA+FGE Y D VRVV++G+ D Sbjct: 581 HIAQKGSLVAPDRLRFDFVHQKPITQDELRKVEDIANDIVLENDEVVTRLMAVDDAREA-GARALFGEKYGDEVRVVSMGKAARD 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_NITHX (Alanyl-tRNA synthetase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=alaS PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 H+ Q+GS+V PE+LRFDF H KP+ + LRRIE I N+ + +V ++ + +A+ G RA+FGE Y D VRVV++G Sbjct: 581 HIAQRGSLVAPERLRFDFVHNKPISADELRRIEDIANDVVLENGEVTTRLMAVDDAREA-GARALFGEKYGDEVRVVSMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_SACD2 (Alanyl-tRNA synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=alaS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V E+LRFDFSH + V PE L++IES+VNEQI+ V E EA + G A+FGE Y D VRV+++G Sbjct: 579 HVTQKGSLVDSERLRFDFSHFEAVKPEELKQIESMVNEQIRLNSPV-ETELCDMEAAQQKGAMALFGEKYGDEVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PELTS (Alanyl-tRNA synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=alaS PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V PE+LRFDF+H PE L+++E +VN + + L V + E +LAEA+++ G A+FGE Y + VRVV +G Sbjct: 581 HVNQAGSLVEPERLRFDFTHYAAATPEELQKVEELVNRMVLSALPVEAFETSLAEARKM-GAAALFGEKYGERVRVVKMG 659
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEPIN (Alanyl-tRNA synthetase OS=Leptospira interrogans GN=alaS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE LRFDFSH + E +R+IES VNE I+ V +KE ++ +AK+ G A FGE Y + VRVV +G Sbjct: 635 HVLQKGSIVSPEYLRFDFSHPSSLTSEEIRQIESWVNESIRKNFPVETKELSIEDAKK-TGAVATFGEKYGERVRVVQMG 713
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_LEPIC (Alanyl-tRNA synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=alaS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE LRFDFSH + E +R+IES VNE I+ V +KE ++ +AK+ G A FGE Y + VRVV +G Sbjct: 635 HVLQKGSIVSPEYLRFDFSHPSSLTSEEIRQIESWVNESIRKNFPVETKELSIEDAKK-TGAVATFGEKYGERVRVVQMG 713
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_GEOTN (Alanyl-tRNA synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=alaS PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI--KAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV+Q GS+V P++LRFDF+H V P+ L RIE+IVNEQI +D+F K L EAK + G A+FGE Y D VRVV +G Sbjct: 583 HVNQAGSLVAPDRLRFDFTHFGQVKPDELERIEAIVNEQIWKSIPVDIFYK--PLEEAKAM-GAMALFGEKYGDIVRVVKVG 661 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |