CX288293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_TREDE (Alanyl-tRNA synthetase OS=Treponema denticola GN=alaS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS + E+LRFDFSH +P+ + +E +VNE IKA+L V + L EAK+I G A+FGE Y D V+V IG Sbjct: 480 HVQQKGSNITAERLRFDFSHPEPMTEAEKKEVERLVNEAIKADLPVTMEVMPLEEAKKI-GAMALFGEKYEDVVKVYKIG 558
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_THIFE (Alanyl-tRNA synthetase OS=Thiobacillus ferrooxidans GN=alaS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH +PV LR IE +VN I+ + ++ +AEA+ + G A+FGE Y D VRVV +G Sbjct: 582 HVQQKGSLVNPERLRFDFSHPEPVTAAQLREIERVVNAAIRNNVGAETRILPVAEAQAL-GAMALFGEKYGDEVRVVRMG 660
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PSESM (Alanyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=alaS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V ++LRFDFSH + + PE LR +E IVN +I+ V ++E + AK+ G A+FGE Y D VRV+++G Sbjct: 579 HVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKNTPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMG 657
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_METFK (Alanyl-tRNA synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=alaS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV QKGS+V P+K RFDFSH PV + +RRIE IVN +I A ++ + EA++ G +FGE Y D VRV+ IG E Sbjct: 580 HVQQKGSLVDPDKTRFDFSHNAPVTADEIRRIEDIVNAEILANTPTLARVMPIDEAQK-TGAMMLFGEKYGDEVRVLDIGTSRE 662
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BRASO (Alanyl-tRNA synthetase OS=Bradyrhizobium sp. (strain ORS278) GN=alaS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 H+ Q+GS+V P++LRFDF H KP+ E L R+E I N+ + +V ++ L +A+ G RA+FGE Y D VRVV++G D Sbjct: 581 HIAQRGSLVSPDRLRFDFVHPKPITAEELARVEDIANDVVLENAEVTTRLMGLDDAREA-GARALFGEKYGDEVRVVSMGNAARD 664
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_BRAJA (Alanyl-tRNA synthetase OS=Bradyrhizobium japonicum GN=alaS PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 37/85 (43.53%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVED 257 H+ Q+GS+V P++LRFDF H KP+ E L R+E I N+ + +V ++ + EA+ G RA+FGE Y D VRVV++GR + Sbjct: 582 HIAQRGSMVAPDRLRFDFVHPKPITAEELARVEDIANDVVLENDEVTTRVMGVDEAREA-GARALFGEKYGDEVRVVSMGRTARE 665
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_RHOPS (Alanyl-tRNA synthetase OS=Rhodopseudomonas palustris (strain BisB5) GN=alaS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGR 245 H+ QKGS+V P++LRFDF H KP+ + LRR+E I N+ I E D + + R G RA+FGE Y D VRVV++G+ Sbjct: 581 HIAQKGSMVAPDRLRFDFVHQKPITQDELRRVEDIAND-IVLENDEVTTRLMAVDDAREAGARALFGEKYGDEVRVVSMGK 660
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PARL1 (Alanyl-tRNA synthetase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=alaS PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIG 242 HV QKGS+V PE+LRFDFSH KP+ PE + +E+IVN I+ +V ++ T +A L A+FGE Y + VRV+A+G Sbjct: 582 HVTQKGSMVGPERLRFDFSHPKPMTPEEISEVETIVNRVIRQNAEVTTRLMTPEDAIAAGAL-ALFGEKYGEEVRVLAMG 660
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_PARD8 (Alanyl-tRNA synthetase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=alaS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-KEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV+QKGS V P+ LRFDFSH + V E +R++E +V E+I+A + + +AEAK + G A+FGE Y D VRVV G VE Sbjct: 580 HVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEHRNMPIAEAKAL-GAMALFGEKYGDEVRVVKYGSSVE 663
BLAST of CX288293 vs. ExPASy Swiss-Prot
Match: SYA_DECAR (Alanyl-tRNA synthetase OS=Dechloromonas aromatica (strain RCB) GN=alaS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 3 Query: 3 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKRINGLRAVFGEVYPDPVRVVAIGRKVE 254 HV QKGS V P+K RFDF H +P+ E +RR+E+IVN +I A + ++ +AEA+++ G +FGE Y D VRV+ IG E Sbjct: 578 HVQQKGSQVDPDKTRFDFVHNQPMTDEEIRRVENIVNAEILANVATETRVLPIAEAQKL-GAMMLFGEKYGDDVRVLDIGSSRE 660 The following BLAST results are available for this feature:
BLAST of CX288293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288293 ID=CX288293; Name=CX288293; organism=Citrus clementina; type=EST; length=682bpback to top |